If you want to upsample to the anatomical space, use mri_vol2vol (run with --help to get examples)
On 4/16/19 5:54 AM, Juhyoung Ryu wrote: > External Email - Use Caution > > Hi Douglas, > Thank you for the response. > > I tried to figure out your suggestion, but as i understand about bbregister, > it provides registration of functional space to anatomical space in > $subjects_dir. > As what i want to do is registration of anatomical data to functional space > by upsampling process, I have no idea how to use the command. > Additionally, I don’t want alignment between anatomical and functional data. > > Could you please tell me more about your suggestion? > > Thank you very much in advance! > Juhyoung > >> On 15 Apr 2019, at 11:42 PM, Greve, Douglas N.,Ph.D. >> <dgr...@mgh.harvard.edu> wrote: >> >> Use bbregister to create the register.dat file. Run it with --help to >> get docs on how to use it. >> >> On 4/15/2019 7:51 AM, Juhyoung Ryu wrote: >>> External Email - Use Caution >>> >>> Hi all, >>> >>> I’d like to upsampling anatomical ROI data, what i created using ribbon >>> file, to the functional resolution. >>> As the anatomical and functional data were aligned, I need only re-slice >>> processing except for coregistration. >>> >>> I tried upsampling using ‘mir_label2vol’, but i have no idea to create >>> ‘register.dat’ file. >>> ‘mri_convert’ with —voxsize flag provides upsampling, but that was all. >>> >>> Would you help me to re-slice ROI data to the functional coordinate? >>> >>> >>> Thank you in advance, >>> Juhyoung >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
