Not sure. Can you tar up the subject and send me the file here ftp://surfer.nmr.mgh.harvard.edu/transfer/incoming? Let me know when it is transferred.
On 1/22/19 12:03 PM, Lalonde, Francois (NIH/NIMH) [E] wrote: > > External Email - Use Caution > > Hi, > > We collected an MP-RAGE scan at .6mm isotropic resolution with the TR > bumped up to TR=5. Subject motion artifacts were mitigated by using a > KinetiCor motion correction system. We followed the recommendations > for processing submillimeter scans described in the FreeSurfer Wiki > i.e. we added the -cm flag to recon-all and included the mris_inflate > -n 100 expert option. The attached PDF of the white matter surfaces > shows that they appear to be underestimated. The surface estimates > fall short of the actual grey/white matter boundary. Arrows point to > the most affected areas and the second image is the same as the first > but without the yellow white matter surface line. FTP is disabled on > my government computer. Please specify the recipient email if I have > to transfer the file using FileDrop. Could you suggest other options > either at the time of scanning or in running recon-all that could help > better segment the white matter? > > Thanks, > > François Lalonde, Ph.D. > > DNU/HGB/NIMH/NIH > > 10 Center Drive, Room 4D18 > > Bethesda, MD. 20892 > > flalo...@nih.gov > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
