sorry, what kind of errors? I could not really tell from the images what the problem was
On 02/20/2018 10:22 AM, Emily Schwartz wrote: > Hi FreeSurfer community, > > I am working on elderly subjects and have had this kind of surface error > quite often in different locations. Usually, it's over about 3-4 slices (in > one view) and can be fixed, but I am finding multiple in almost every subject > and therefore taking a lot of time to edit (and then once reprocessed new > ones sometimes come up in different locations). I was wondering if these are > normal to have, minor surface errors that do not necessarily need to be > fixed. I have added images of an example below. Here are some of the values I > get from aparc.stats for caudal middle frontal lh after manually editing: > > Surface area: > Original - 2500 mm^2 > Edited - 2532 mm^2 > > Grey volume: > Original - 1710 mm^3 > Edited - 1727 mm^3 > > Thickness avg > Original - 4455 mm std: 2.371 > Edited - 4445 mm std: 2.365 > > Although the thickness values only differ by 10 mm, we are a little concerned > because the difference is not within the standard deviation. > > Please let me know if all of these errors should be edited or if it may be > okay to keep the smaller segmentation/topological errors as they are. > > Thank you, > > Emily > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
