That file should be in the same dimensions, no?
On 1/30/18 12:19 AM, Ashley Cole wrote:
I just noticed that that file "fmc.odd.sm5.nii.gz" is created after
selxavg3-sess. I was wondering how can I preprocess the functional
image and have the output with the same dimension as the f.nii.gz
without performing any contrasts. I just need to look at the signal in
some ROIs without performing any contrasts. I hope this makes sense.
Thanks,
Ash
On Mon, Jan 29, 2018 at 10:54 PM, Ashley Cole <coleashle...@gmail.com
<mailto:coleashle...@gmail.com>> wrote:
Hello,
I have several nifti files. I have preprocessed some of them
before. I used this command:
preproc-sess -s sess01 -fsd bold -stc odd -surface self lhrh
-mni305 -fwhm 5 -per-session -force
The output files contained fmc.odd.sm5.self.lh.nii.gz,
fmc.odd.sm5.self.rh.nii.gz, fmc.odd.sm5.mni305.2mm.nii.gz, and
*fmc.odd.sm5.nii.gz*. Which this last one (fmc.odd.sm5.nii.gz) was
the file that I needed for my further analyses. However, when I
run the same command on another nifti file which was obtained from
the same scanner and the same session, the output doesn't have the
fmc.odd.sm5.nii.gz.
I ran it several times but it never gave me that file. Also, it
doesn't give me any errors.
I appreciate any help.
Ash
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