Dear Bruce is there any 3D image file which shows the segmentation regions after this correction ?and if there is not is it right to use aseg.mgz file for reporting Dice or Jaccard Index (I have manual segmentation as gold standard)?
Best Regards, Nazanin On Wed, Jan 18, 2017 at 5:18 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > Hi Nazanin > > the volumes reported in the aseg.stats file have been corrected for > partial volume effects. > > cheers > Bruce > > On Wed, 18 Jan 2017, N Saf wrote: > > Dear FreeSurfers, >> I have a question about aseg file. I load the aseg file of bert subject in >> itk-snap and read the volume for 17 and 53 label but it is a bit larger of >> the volume in bert stats file. I do the same for some of my subjects too >> and >> I see the same result .I don't know why it is like that ?would you please >> clear the reason for me.because I need to compare the FreeSurfer result >> and >> I should use of aseg file labels but I'm afraid the comparison I'm doing >> is >> not valid. >> >> Sincerely yours, >> Nazanin >> >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
