Ok. Will try to run it locally. thanks On Mon, Nov 21, 2016 at 5:00 PM, Ruopeng Wang <rpw...@nmr.mgh.harvard.edu> wrote:
> This is likely due to remote display. Would it be possible for you to run > it locally? You can also adjust overlay settings from the command-line, > although it is not as convenient as the GUI. Run “freeview -h” and look for > surface overlay related options. > > On Nov 21, 2016, at 9:48 AM, Emmanuel Nwosu <emmanuel.c.nw...@gmail.com> > wrote: > > Yes am running it on a remote server. Here is the screen shot > > On Mon, Nov 21, 2016 at 4:40 PM, Ruopeng Wang <rpw...@nmr.mgh.harvard.edu> > wrote: > >> Can you post a screenshot? Are you running freeview remotely? >> >> On Nov 21, 2016, at 9:32 AM, Emmanuel Nwosu <emmanuel.c.nw...@gmail.com> >> wrote: >> >> it opens a blank "configure overlay" dialog, then the screen goes dark >> >> On Mon, Nov 21, 2016 at 4:29 PM, Ruopeng Wang <rpw...@nmr.mgh.harvard.edu >> > wrote: >> >>> What happens when you click on the button? >>> >>> On Nov 21, 2016, at 9:02 AM, Emmanuel Nwosu <emmanuel.c.nw...@gmail.com> >>> wrote: >>> >>> Thanks Ruopeng. I can't open the configure overlay button. Is there any >>> other means of changing it? >>> >>> On Mon, Nov 21, 2016 at 3:58 PM, Ruopeng Wang < >>> rpw...@nmr.mgh.harvard.edu> wrote: >>> >>>> You need to adjust the color scale. Click on “Configure Overlay” button >>>> to adjust it. >>>> >>>> Best, >>>> Ruopeng >>>> >>>> On Nov 21, 2016, at 3:52 AM, Emmanuel Nwosu <emmanuel.c.nw...@gmail.com> >>>> wrote: >>>> >>>> Hi >>>> >>>> Am having a bit of a problem that may be easy to resolve. >>>> >>>> I want to view an LGI two-group comparison I did in mri glm-fit with >>>> freeview. Each time I load the overlay (cache.th13.abs.sig.cluster.mgh). >>>> The grayscale inflated surface turns red like what is in picture-1 >>>> >>>> Please have anyone an idea why this is happening and what I can do to >>>> change it back to grayscale like picture 2 >>>> Thanks for your help >>>> >>>> Emmanuel >>>> >>>> <picture-1.jpg><picture-2.jpg>______________________________ >>>> _________________ >>>> Freesurfer mailing list >>>> Freesurfer@nmr.mgh.harvard.edu >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> >>>> _______________________________________________ >>>> Freesurfer mailing list >>>> Freesurfer@nmr.mgh.harvard.edu >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> The information in this e-mail is intended only for the person to whom >>>> it is >>>> addressed. If you believe this e-mail was sent to you in error and the >>>> e-mail >>>> contains patient information, please contact the Partners Compliance >>>> HelpLine at >>>> http://www.partners.org/complianceline . If the e-mail was sent to you >>>> in error >>>> but does not contain patient information, please contact the sender and >>>> properly >>>> dispose of the e-mail. >>>> >>>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >>> >>> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > <screen shot.png>_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
