Hi Anri - I do not know what command line you ran and what your
configuration file looks like, so it is very hard for me to suggest
solutions.
Best,
a.y
On Fri, 27 May 2016, Anri WATANABE wrote:
Hi Anastasia,
Thank you for your answer.
There aren't stats/*.path.mean.txt files and terminal says 'Could not read
/Applications/freesurfer/subjects/cvs_avg35.' I
checked /Application/freesurfer/subjects/cvs_avg35 folder and couldn't find
COR-.info file.
Could you tell me any resolutions, please?
Thanks,
Anri
**********************************************************************
京都府立医科大学附属病院
精神科・心療内科
渡辺 杏里
**********************************************************************
Anri WATANABE, M.D.
Department of Psychiatry,
University Hospital, Kyoto Prefectural University of Medicine
**********************************************************************
2016-05-21 6:48 GMT+09:00 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>:
Hi Anri - The FA values are extracted in the native space of each
subject, which is why those are the only
coordinates that you see. If you want to display the results of your
analysis on an average path, after
running trac-all -stat, you can use the stats/*.path.mean.txt files (see
also the last part of the TRACULA
tutorial).
Best,
a.y
On Wed, 18 May 2016, Anri WATANABE wrote:
Dear experts,
I use TRACULA to examine a measure (FA) at each voxel in one
pathway.
pathstats.byvoxel.txt files show coordinates in native space and
after converting those the new
files don't show any coordinates which are in MNI space.
Could you tell me how can I know MNI coordinate values?
Thank you!
Regards,
Anri
**********************************************************************
京都府立医科大学附属病院
精神科・心療内科
渡辺 杏里
**********************************************************************
Anri WATANABE, M.D.
Department of Psychiatry,
University Hospital, Kyoto Prefectural University of Medicine
**********************************************************************
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
