Dear Tracula developers
I thought I had nearly reached the end of tracula processing. However, when I perform the step, trac-all -stat -c dmrirc_ind_mni_cvs_all_stats.all I receive this error message . Base name of output files: /work/imagingC/Rowe/p00363/freesurfer/all/subs_tracts/stats/lh.cst_AS.avg33_ cvs_flt Text file with list of individual inputs: /work/imagingC/Rowe/p00363/freesurfer/all/subs_tracts/stats/lh.cst_AS.avg33_ cvs_flt.inputs.txt Loading output reference volume from /home/spj24/app/freesurfer/subjects/cvs_avg35 corRead(): can't open file /home/spj24/app/freesurfer/subjects/cvs_avg35/COR-.info ERROR: Could not read /home/spj24/app/freesurfer/subjects/cvs_avg35 There is no file called COR-.info in the directory /home/spj24/app/freesurfer/subjects/cvs_avg35/ I have commented nearly all lines from the file dmrirc_ind_mni_cvs_all_stats.all to leave a minimum configuration file and then the script runs without error. However, in that case the stats directory created only contains files related to avg33_mni_bbr ( and mni_flt if I add the switch set doregflt = 1). There are no cvs files. I am using tracula.update.centos4_x86_64.5.3.2014_05_26 in freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0. I performed all tracula processing steps before stats without the tracula.update.centos4_x86_64.5.3.2014_05_26, and then added the update to perform the stat step. Thanks for your help, Simon
lh.cst_AS.avg33_cvs_flt.log
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