Thanks Here is attached. INFO: SUBJECTS_DIR is /Applications/freesurfer/subjects/subject_provaINFO: Diffusion root is /Applications/freesurfer/subjects/subject_provaActual FREESURFER_HOME /Applications/freesurfertrac-preproc -c $SUBJECTS/Control75/scripts/dmrirc.local -log $SUBJECTS/Control75/scripts/trac-all.log -cmd $SUBJECTS/Control75/scripts/trac-all.cmd#-------------------------------------/Applications/freesurfer/bin/trac-preproc #-------------------------------------#@# Image corrections Wed Jul 22 15:45:27 CEST 2015mri_convert $SUBJECTS/Control75/data.nii.gz $SUBJECTS/Control75/dmri/dwi_orig.nii.gzcp $SUBJECTS/Control75/bvecs.txt $SUBJECTS/Control75/dmri/dwi_orig.mghdti.bvecscp $SUBJECTS/Control75/bvals.txt $SUBJECTS/Control75/dmri/dwi_orig.mghdti.bvalsmv -f $SUBJECTS/Control75/dmri/bvecs.tmp $SUBJECTS/Control75/dmri/dwi_orig.mghdti.bvecsmv -f $SUBJECTS/Control75/dmri/bvals.tmp $SUBJECTS/Control75/dmri/dwi_orig.mghdti.bvalsflip4fsl $SUBJECTS/Control75/dmri/dwi_orig.nii.gz $SUBJECTS/Control75/dmri/dwi_orig_flip.nii.gzERROR: $SUBJECTS/Control75/dmri/dwi_orig.nii.gz does not exist
----Messaggio originale---- Da: fis...@nmr.mgh.harvard.edu Data: 22-lug-2015 15.38 A: <std...@virgilio.it>, "Freesurfer support list"<freesurfer@nmr.mgh.harvard.edu> Ogg: Re: [Freesurfer] mri_convert command line did not provide output file Hi Stefano can you send us the command that was run and the full output? Bruce On Wed, 22 Jul 2015, std...@virgilio.it wrote: > Hi list, > > mri_convert command line did not provide output file. > > This error was produced during the first computations of trac-all -prep > command line. > > > Stefano > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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