Dear FS experts, I am new to freesurfer and have a few basic questions.
I have a sample of 8-17 year olds in which I will be looking at both cortical thickness and subcortical volumes. I understand that the surface-based registrations seem to be fine for this age range (as per Ghosh et al, 2010), but am wondering about the volume-based registrations? Should I be using make_average_subject to make a study specific target? Also, am I correct in thinking that the output from recon -all is in native space and that registration to common space only occurs at mris_preproc? Many thanks for any help! Best, Kristi
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