Hello,
I am using freesurfer for the first time, and I am having issues when I try to run recon-all for my first subject. My details are: FREESURFER_HOME: /usr/local/freesurfer Build stamp: freesurfer-Linux-centos4-stable-pub-v5.3.0 Debian version: jessie/sid Kernel info: Linux 3.13.0-37-generic i686 Subject name: Y03 Command line: fsuser@xubuntu-VirtualBox:~/host/Sprachlernen$ recon-all -all -subjid Y03 Error message: "recon-all exited with ERRORS at Fri Oct 10 02:42:23 EDT 2014 " recon-all.log: attached. I am running freesurfer within Virtual Box on a windows host, and my subjects folder is in a shared folder /home/fsuser/host and is called /home/fsuser/host/Sprachlernen/Subjects I first mounted this shared folder by entering sudo mount -t vboxsf Kate /home/fsuser/host and then designated this as my subjects folder by entering export SUBJECTS_DIR=/home/fsuser/host/Sprachlernen/Subjects I then created the subject data directory using recon-all -i Y03_1 -i Y03_2 -subjid Y03 before running recon-all -all. Any assistance would be much appreciated. Kind regards, Kate Riggall
recon-all.log
Description: Binary data
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