On 03/18/2014 05:05 PM, Lin, Amy (NIH/NIMH) [F] wrote: > Hello all, > > I think this is a fairly simple question, but I could not find an existing > answer online. If I close out the terminal window while recon is running, > will the process end? I've had the issue in the past where my computer has > gone to sleep and the process ends up exiting with error. I would expect the process to die. You can try running it with "nohup", ie, something like
nohup recon-all -s subject -all > > Also, is it possible to rerun a recon command after a previous failed attempt > without being prompted to delete the older files that had already been made? > I know that usually if you attempt to rerun a recon command after you have > already tried, you're usually prompted to remove the older files. This time > around, I wasn't ever prompted to do that but the scripts show that the last > time recon-all ran, it completed without error. What older files? It may prompt you to delete the "IsRunning" file. Or you can add -no-isrunning to the command line doug > > Thanks very much! > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
