Hi Saurabh this is all done for you in recon-all (not tkmedit). Why not just run it?
Bruce On Mon, 10 Mar 2014, Saurabh Thakur wrote: > Hello freesurfer Expert, > Steps for measuring cortical thickness are in tkmedit : > 1. > > Intensity normalisation, > > 2. > > Registration to Talairach space, > > 3. > > Skull stripping, > > 4. > > Segmentation of white matter, > > 5. > > Tesselation of the WM boundary, > > 6. > > Smoothing of the tesselated surface and automatic topology correction > > Can u help me to step no 5 and 6. How to do this steps. > > Thanks, > Saurabh Thakur, > > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
