Hi Saurabh

have you run recon-all on your subjects? If so, you should be all set (see my previous email)

cheers
Bruce


On Wed, 12 Feb 2014, Saurabh Thakur wrote:

Hello Free surfer Expert,

I have started working on Free surfer. Now i m facing two issues such as :

1. I m trying to use contour ...

    but it is working as per guidance in website given.
   https://surfer.nmr.mgh.harvard.edu/fswiki/FreeviewGuide/FreeviewTools/Voxel
Edit

   Under heading of Contour Draw....can any tell me pre requisite to draw
contour.

   I have loaded T1 image and then made new volume....after tat ctrl+alt+
left click....not working...?

     Can any one help me with contour function, how to use in details.


2. I wanted to do segmentation of image into WM,GM and CSF.

    Please suggest what the best way/ Algorithm to so get MRI image
segmentation using Freesurfer.



Thanks in advance.


cheers
Saurabh Thakur,





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