Sounds like it is some problem with the display libraries. I think
someone else was having the same problem recently (ie, hemisphere
displayed upside down in tksurfer). Does anyone remember? Zeke?
doug
On 1/12/14 5:03 AM, Schweren, LJS (med) wrote:
No, in Freeview I encountered no such problems. Also in tkmedit the brains
appear in normal orientation.
Also, the scale bars and titles are displayed upside down in tksurfer.
Best, Lizanne
Does the same thing happen in freeview?
On 01/06/2014 04:45 AM, L. Schweren wrote:
>
> Dear experts,
>
> I ran recon-all with qcache. When loading the right hemisphere of
> fsaverage (or any other surface reconstruction) into tksurfer (for
> example command: tksurfer fsaverage rh white), the left hemisphere
> surface is displayed, and it is upside down. When I import annotations
> they load in the same orientation as the surface. However, the
> coordinates and the labels, displayed in the Tksurfer Tools window,
> are not. For example, when I move the cursor to the temporal lobe, the
> label says it’s postcentral. I do not mind manually turning the
> surfaces in tksurfer, but I do need to be sure I am looking at the
> correct hemispheres, coordinates and labels.
>
> I hope you can help me solve this. Thank you in advance.
>
> Best wishes,
>
> Lizanne
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
>https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop:https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing:ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
------------------------------------------------------------------------
De inhoud van dit bericht is vertrouwelijk en alleen bestemd voor de
geadresseerde(n). Anderen dan de geadresseerde(n) mogen geen gebruik
maken van dit bericht, het niet openbaar maken of op enige wijze
verspreiden of vermenigvuldigen. Het UMCG kan niet aansprakelijk
gesteld worden voor een incomplete aankomst of vertraging van dit
verzonden bericht.
The contents of this message are confidential and only intended for
the eyes of the addressee(s). Others than the addressee(s) are not
allowed to use this message, to make it public or to distribute or
multiply this message in any way. The UMCG cannot be held responsible
for incomplete reception or delay of this transferred message.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
