Hi Santosh not sure if anyone else answered this, but try running
recon-all -make all and see if that does the trick. cheers Bruce On Fri, 15 Nov 2013, Santosh Kumar wrote:
Hi experts, I came across an error in the third stage of reconstruction using freesurfer. I am rerunning freesurfer on windows 7 64 bit: freesurfer-Virtualbox-linux-x86-stable-pub-v5.1.0-full I have following error: #@# Sphere rh Fri Nov 15 14:28:04 EST 2013 /home/virtualuser/freesurfer/subjects/HF5015/scripts mris_sphere -seed 1234 ../surf/rh.inflated ../surf/rh.sphere setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.57 2011/03/02 00:04:34 nicks Exp $ $Id: mrisurf.c,v 1.693.2.2 2011/04/27 19:21:05 nicks Exp $ reading original vertex positions... MRISreadVertexPosition(smoothwm): could not open file ../surf/rh.smoothwm No such file or directory MRISreadOriginalProperties: could not read surface file smoothwm No such file or directory Linux FreeSurfer 2.6.28-11-generic #42-Ubuntu SMP Fri Apr 17 01:57:59 UTC 2009 i686 GNU/Linux recon-all -s HF5015 exited with ERRORS at Fri Nov 15 14:28:08 EST 2013. Any help! With regards, Santosh
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