No problem. By original I mean the file that you specify by "set bvecfile = ..." in your config file. That one need to be in columns, not rows.

On Wed, 13 Nov 2013, Laura Christine Anderson wrote:

Thanks! What do you mean by my "original TLR108.bvec file"? I think the
issue may be that the bvec and bval files were originally created using
dcm2nii before we had decided to use Tracula. I am just having trouble
determining in which directory the original bvec and bval files were
created, because it seems like those are outdated and incorrect and are
affecting the creation of bvecs and bvals in the dmri directory

Sorry for my naïve questions- I really appreciate your help.

Laura
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