Thanks.
These are the output[iMac-di-Stefano:Con28/SUBJECTS_DIR/surf] Stefano%
mris_calc lh.area stats Size
[ 126850 ] Min@(index)
[ -0.322716 (56402) ] Max@(index) [
12.367171 (123284) ] Mean
[ 0.587518 ] Std
[ 0.402374 ] Sum
[ 74526.703125 ] Prod
[ 0.000000 ][iMac-di-Stefano:Con28/SUBJECTS_DIR/surf] Stefano% mris_calc
lh.area.pial stats Size
[ 126355 ] Min@(index) [
0.000000 (97676) ] Max@(index) [
22.833410 (119901) ] Mean
[ 0.785660 ] Std
[ 0.738523 ] Sum
[ 99272.054688 ] Prod
[ 0.000000 ]
but I do not understand what's happen.
Stefano
----Messaggio originale----
Da: rudo...@nmr.mgh.harvard.edu
Data: 12-set-2013 14.49
A: <std...@virgilio.it>
Cc: <freesurfer@nmr.mgh.harvard.edu>
Ogg: Re: [Freesurfer] mris_calc erroe in recon-all
The error would indicate that the number of elements in 'lh.area' and
'lh.area.pial' are not the same. You can check this also with mris_calc:
mris_calc lh.area stats
mris_calc lh.area.pial stats
which will provide some basic statistical output, including the size
(i.e. number of elements) of each. The sizes have to match in order to add.
HTH
-=R
On 9/12/13 02:56 , std...@virgilio.it wrote:
> Hi list,
>
> I have a problem during recon-all
>
> #@# Surf Volume lh Thu Sep 12 08:25:31 CEST 2013
> /Applications/freesurfer/subjects/subject_prova/Con28/SUBJECTS_DIR/surf
> \n mris_calc -o lh.area.mid lh.area add lh.area.pial \n
>
> mris_calc:
> Sorry, but I seem to have encountered an error.
> While checking on input filetype sizes,
> I found a size mismatch, i.e. len(input1)!=len(input2)
>
> Darwin iMac-di-Stefano.local 12.4.0 Darwin Kernel Version 12.4.0: Wed
> May 1 17:57:12 PDT 2013; root:xnu-2050.24.15~1/RELEASE_X86_64 x86_64
>
> recon-all -s SUBJECTS_DIR exited with ERRORS at Thu Sep 12 08:25:31
> CEST 2013
>
> For more details, see the log file
> /Applications/freesurfer/subjects/subject_prova/Con28/SUBJECTS_DIR/scripts/recon-all.log
> To report a problem, see
> http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>
>
> Thanks,
>
>
>
> Stefano
>
>
> _______________________________________________
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--
Rudolph Pienaar, M.Eng, D.Eng / email: rudo...@nmr.mgh.harvard.edu
MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging
149 (2301) 13th Street, Charlestown, MA 02129 USA
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