Hi Liane
the brainmask is not for subcortical segmentation - use the norm.mgz if
you want to visualize subcortical structures
cheers
Bruce
On Tue, 16 Jul 2013, Liane
Hunter wrote:
Hello,
I noticed that when I am checking the subcortical segmentation the brainmask
does not accurately display the
subcortical structures
( ie. the putamen is too small). The segmentation appears to be correct when I
compare it to the original
file. Does anyone know why this is the case?
Also, if I make changes to the subcortical segmentation based on the original
file will this change accurately
edit the brainmask?
Thank you.
Sincerely,
Liane
Liane HunterMD/Ph.D Candidate
Albert Einstein College of Medicine
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