Hi Jeff mri_label2label should do what you want Cheers Bruce On Jul 12, 2013, at 6:45 PM, Jeff Eriksen <eriks...@ohsu.edu> wrote:
> I have the Yeo resting-state fMRI atlases which I downloaded from > > http://www.freesurfer.net/fswiki/CorticalParcellation_Yeo2011 > > They consist of 3 versions, fsaverage being of interest here. The > fsaverage folder provided includes the typical FS folders corresponding a > recon-all for the average brain for this atlas. I wish to use this high > resolution atlas to parcellate my individual subjects. I am unclear how to > go about this. I have perused wiki pages on > > Annotation files > FS labels > Automatic surface labeling process > Surface registration process > > but still do not find a clear path to my goal. Specifically I would like > to end up with a matching set of surface and annot files, as high of > resolution as possible, for each of my subjects. Using some specific > numbers, the Yeo atlas has around 300,000 vertices when combining the > lh.pial and rh.pial surfaces. The matching annot files I believe are > l&rh.Yeo2011_17Networks_N1000.annot, which together should also have > 300,000 vertices. I suppose what I need to do is align each of my subjects > to this atlas and project the atlas onto each subject to get a new surface > and annot file for that subject, which will have some unique number of > vertices for each subject. > > Please point me to the right set of documentation that will tell me how to > do this. Thanks, > > -Jeff > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
