Hi Longchuan, when I asked for the terminal output, I meant the stuff that gets printed to the screen when the command runs. Try running it outside of your script to capture the output. Also, does the old program require 20G ? doug
On 08/27/2012 04:20 PM, Longchuan Li wrote: > Hi, Doug > Here is the output from my log file and my command. I have been > running this command many times and sometimes the job got killed, but > sometimes they finished without error. > > /usr/local/sge/bitc/spool/node13/job_scripts/77912: line 7: 30345 > Killed > /home/lli/freesurferv51/bin/mri_label2vol.linux --offset 1 --annot > /home/lli/freesurferv51/subjects/RVJ8_Preuss_20111115/label/rh.randomroi300_WithoutMedialWall.MacaqueYerkes6_to_RVJ8_Preuss_20111115.annot > > --temp > /home/lli/freesurferv51/subjects/RVJ8_Preuss_20111115/mri/brain.mgz > --subject RVJ8_Preuss_20111115 --hemi rh --fillthresh 0 --proj frac 0 > 0.5 0.05 --o > /home/lli/freesurferv51/subjects/RVJ8_Preuss_20111115/mri/rh.randomroi300_WithoutMedialWall_Ribbon.MacaqueYerkes6_to_RVJ8_Preuss_20111115_fill0_projs0_proje0.5_projin0.05.nii.gz > > --identity > > Many thanks in advance! > > Longchuan > > > ------------------------------------------------------------------------ > *From:* Douglas Greve <gr...@nmr.mgh.harvard.edu> > *To:* Longchuan Li <leonad...@yahoo.com> > *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu> > *Sent:* Monday, August 27, 2012 3:47 PM > *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to > transfer ic2.tri > > What is your command line and what is the terminal output? > doug > > > On 8/27/12 7:57 PM, Longchuan Li wrote: >> Hi, Doug >> >> This is a follow-up question regarding an updated code you sent to me >> earlier (mri_label2vol.linux). I noticed that this program frequently >> takes around ~20G RAM to run and easily get killed by Linux (I >> supposed) when I ran multiple subjects, because of the large amount >> of RAM used. Has anyone else proposed the issue? and if so, do you >> have any suggestions on solving the issue? >> >> Thank you! >> >> Longchuan >> >> ------------------------------------------------------------------------ >> *From:* Leon <leonad...@yahoo.com> <mailto:leonad...@yahoo.com> >> *To:* Douglas N Greve <gr...@nmr.mgh.harvard.edu> >> <mailto:gr...@nmr.mgh.harvard.edu> >> *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu> >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> *Sent:* Friday, June 8, 2012 3:48 PM >> *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> transfer ic2.tri >> >> Hi, Doug >> I have run and checked the data and the problem has been perfectly >> solved. Thank you for the help! >> >> Leon >> >> ------------------------------------------------------------------------ >> *From:* Douglas N Greve <gr...@nmr.mgh.harvard.edu> >> <mailto:gr...@nmr.mgh.harvard.edu> >> *To:* Leon <leonad...@yahoo.com> <mailto:leonad...@yahoo.com> >> *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu> >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> *Sent:* Friday, June 8, 2012 1:32 PM >> *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> transfer ic2.tri >> >> I've put a new version of mri_label2vol at that ftp site. When you run >> it, add "--offset 1". This will change the segmentations IDs to go from >> 1-162 instead of 0-161. >> doug >> >> On 06/08/2012 11:30 AM, Leon wrote: >> > Hi, Douglas >> > >> > I checked the data this morning and confirmed that the missing ROI in >> > the volume space is vertex_0 (see attached). Totally there are 162 >> > entries in the annotation file, but only 161 left in the volume file >> > after transferring the annotation file to the volume using >> > mri_label2vol and the intensity value ranges from 1 to 161. >> > >> > Thanks >> > >> > Leon >> > >> > PS: I am sending the message again because I was told that the image >> > for the previous mail is too big. >> > >> > *From:* Leon <leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > *To:* Douglas N Greve <gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu>> >> > *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >> > *Sent:* Thursday, June 7, 2012 10:52 PM >> > *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> > transfer ic2.tri >> > >> > Hi, Douglas >> > >> > Thank you very much for taking care of it. The ROIs ending with 2 and >> > 5s have been correctly labeled and have volumes now after running the >> > fixed version of mris_make_face_parcellation. However, there is still >> > one ROI missing in the volume data that is located at the top of the >> > postcentral gyrus after the annotation file was transferred from the >> > subject's surface to the volume using mri_label2vol. I checked the >> > index of the ROI yesterday (I am at home now and do not have access to >> > the data) and I remember the index of the missing ROI is vertex_0 and >> > the location of the ROI is identical as the one in the picture I >> > attached in the previous email. Do you think it might be because the >> > mri_label2vol overlooks the index of 0, as the intensity value in the >> > volumes starts with 1? >> > >> > I would appreciate your help on this. >> > >> > Leon >> > >> > *From:* Douglas N Greve <gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu>> >> > *To:* Leon <leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >> > *Sent:* Thursday, June 7, 2012 2:03 PM >> > *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> > transfer ic2.tri >> > >> > Hi Leon, I found the problem. mris_make_face_parcellation was actually >> > merging several units together. You can get a fixed version from here: >> > >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mris_make_face_parcellation.linux >> > Let me know how it goes >> > doug >> > >> > On 06/04/2012 02:44 PM, Leon wrote: >> > > Hi, Douglas >> > > I have uploaded the file to the system. >> > > Also, my new results showed that when ic3.tri (instead of ic2.tri) >> > > is used as the input, one ROI at the similar location is also >> missing. >> > > Hope it will help you diagnose. >> > > >> > > Thanks >> > > Leon >> > > >> > > *From:* Douglas N Greve <gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu> >> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>>> >> > > *To:* Leon <leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>>> >> > > *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>>> >> > > *Sent:* Monday, June 4, 2012 1:00 PM >> > > *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> > > transfer ic2.tri >> > > >> > > Can you upload the subject to our file drop system? >> > > >> > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> > > >> > > >> > > >> > > >> > > On 06/04/2012 12:24 PM, Leon wrote: >> > > > Hi, Douglas >> > > > >> > > > Thank you very much for the updated one. I tested the new codes and >> > > > the problem is still there. The ID for the original version that >> > > > generates a mask with one missing ROI is: >> > > > >> > > > $Id: mri_label2vol.c,v 1.38 2011/09/30 15:17:59 greve Exp $ >> > > > >> > > > I remember this is a version I downloaded from a link in FS >> archive. >> > > > >> > > > The ID for the one you sent to me is: >> > > > >> > > > $Id: mri_label2vol.c,v 1.34.2.4 2011/09/30 15:19:36 greve Exp $ >> > > > >> > > > They look almost identical. Do you have any ideas what else may >> cause >> > > > this issue and possible workaround? >> > > > >> > > > Thank you >> > > > >> > > > Leon >> > > > >> > > > >> > > > *From:* Douglas Greve <gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu> >> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> >> > > <mailto:gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu> <mailto:gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu>>>> >> > > > *To:* freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>>> >> > > > *Sent:* Friday, June 1, 2012 11:29 PM >> > > > *Subject:* Re: [Freesurfer] missing ROI when using mri_label2vol to >> > > > transfer ic2.tri >> > > > >> > > > >> > > > What version are you using? I fix a problem last Sept that might be >> > > > like this. I've put a new version of mri_label2vol here: >> > > > >> > > >> > >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_label2vol.linux >> > > > Try this and let me know if it works. >> > > > doug >> > > > >> > > > >> > > > On 6/1/12 10:46 PM, Leon wrote: >> > > >> Hi, Bruce >> > > >> Here are my two command lines >> > > >> For transferring the annot from the source template to the target >> > > >> subject: >> > > >> >> > > >> /home/freesurfer/bin/mri_surf2surf --srcsubject ${srcsubject} >> > > >> --sval-annot rh.ic2.annot --trgsubject ${trgsubject} --trgsurfval >> > > >> src_2_trg.annot --hemi rh --surfreg sphere.reg0 >> > > >> >> > > >> Where sphere.reg0 is the registration from the target subject >> to the >> > > >> source subject. >> > > >> >> > > >> For transfer them to the volume file: >> > > >> >> > > >> /home/freesurfer/bin/mri_label2vol --annot src_2_trg.annot --temp >> > > >> ${fs_dir}/${trgsubject}/mri/brain.mgz --subject ${trgsubject} >> --hemi >> > > >> rh --fillthresh 0 --proj frac 0.3 0.8 0.05 --o src_2_trg_annot.mgz >> > > >> --identity >> > > >> >> > > >> >> > > >> Here is output for one of my transformations: >> > > >> >> > > >> Setting mapmethod to nnf >> > > >> Source registration surface changed to sphere.reg0 >> > > >> Target registration surface changed to sphere.reg0 >> > > >> srcsubject = MacaqueA >> > > >> srcval = (null) >> > > >> srctype = >> > > >> trgsubject = MacaqueB >> > > >> trgval = >> > > >> >> > > >> > >> /home/freesurfer/freesurfer/subjects/MacaqueB/label/rh.MacaqueA_to_MacaqueB.annot >> > > >> trgtype = >> > > >> srcsurfreg = sphere.reg0 >> > > >> trgsurfreg = sphere.reg0 >> > > >> srchemi = rh >> > > >> trghemi = rh >> > > >> frame = 0 >> > > >> fwhm-in = 0 >> > > >> fwhm-out = 0 >> > > >> label-src = (null) >> > > >> label-trg = (null) >> > > >> OKToRevFaceOrder = 1 >> > > >> Reading source surface reg >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueA/surf/rh.sphere.reg0 >> > > >> Loading source data >> > > >> Reading surface file >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueA/surf/rh.orig >> > > >> reading colortable from annotation file... >> > > >> colortable with 162 entries read (originally >> > > >> /usr/local/freesurfer/lib/bem/ic2.tri) >> > > >> Reading target surface reg >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueB/surf/rh.sphere.reg0 >> > > >> Done >> > > >> Mapping Source Volume onto Source Subject Surface >> > > >> surf2surf_nnfr: building source hash (res=16). >> > > >> Surf2Surf: Forward Loop (61916) >> > > >> >> > > >> Surf2Surf: Dividing by number of hits (61916) >> > > >> INFO: nSrcLost = 17467 >> > > >> nTrg121 = 61916, nTrgMulti = 0, MnTrgMultiHits = 0 >> > > >> nSrc121 = 35292, nSrcLost = 17467, nSrcMulti = 28910, >> MnSrcMultiHits >> > > >> = 0.920927 >> > > >> Saving target data >> > > >> Converting to target annot >> > > >> Saving to target annot >> > > >> >> > > >> > >> /home/freesurfer/freesurfer/subjects/MacaqueB/label/rh.MacaqueA_to_MacaqueB.annot >> > > >> step2: writing the surface label to volume... >> > > >> Number of labels: 0 >> > > >> Annot File: >> > > >> >> > > >> > >> /home/freesurfer/freesurfer/subjects/MacaqueB/label/rh.MacaqueA_to_MacaqueB.annot >> > > >> Template Volume: >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueB/mri/brain.mgz >> > > >> Outut Volume: >> > > >> >> > > >> > >> /home/freesurfer/freesurfer/subjects/MacaqueB/mri/rh_MacaqueA_to_MacaqueB_fill0_porjs0.3_proje0.8_projin0.05.mgz >> > > >> Registration File: (null) >> > > >> Fill Threshold: 0 >> > > >> Label Vox Vol: 1 >> > > >> ProjType: frac >> > > >> ProjTypeId: 2 >> > > >> ProjStart: 0.3 >> > > >> ProjStop: 0.8 >> > > >> ProjDelta: 0.05 >> > > >> Subject: MacaqueB >> > > >> Hemi: rh >> > > >> UseNewASeg2Vol: 1 >> > > >> DoLabelStatVol 0 >> > > >> $Id: mri_label2vol.c,v 1.38 2011/09/30 15:17:59 greve Exp $ >> > > >> Template RAS-to-Vox: -------- >> > > >> -1.000 -0.000 -0.000 160.000; >> > > >> -0.000 -0.000 -1.000 160.000; >> > > >> -0.000 1.000 -0.000 160.000; >> > > >> -0.000 -0.000 -0.000 1.000; >> > > >> Template Voxel Volume: 1 >> > > >> nHits Thresh: 0 >> > > >> Using Identity Matrix >> > > >> RegMat: -------- >> > > >> 1.000 0.000 0.000 0.000; >> > > >> 0.000 1.000 0.000 0.000; >> > > >> 0.000 0.000 1.000 0.000; >> > > >> 0.000 0.000 0.000 1.000; >> > > >> Label RAS-to-Vox: -------- >> > > >> -1.000 0.000 0.000 160.000; >> > > >> 0.000 0.000 -1.000 160.000; >> > > >> 0.000 1.000 0.000 160.000; >> > > >> 0.000 0.000 0.000 1.000; >> > > >> INFO: loading surface >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueB/surf/rh.white >> > > >> nvertices = 61916 >> > > >> Reading thickness >> > > >> /home/freesurfer/freesurfer/subjects/MacaqueB/surf/rh.thickness >> > > >> Loading annotations from >> > > >> >> > > >> > >> /home/freesurfer/freesurfer/subjects/MacaqueB/label/rh.MacaqueA_to_MacaqueB.annot >> > > >> reading colortable from annotation file... >> > > >> colortable with 162 entries read (originally >> > > >> /usr/local/freesurfer/lib/bem/ic2.tri) >> > > >> annotidmax = 162 >> > > >> Allocating Hit Volume (1013448704) voxels >> > > >> nlabels = 162 >> > > >> >> > > >> PVF (null) >> > > >> Thesholding hit volume. >> > > >> mri_label2vol done >> > > >> >> > > >> *From:* Bruce Fischl <fis...@nmr.mgh.harvard.edu >> <mailto:fis...@nmr.mgh.harvard.edu> >> > <mailto:fis...@nmr.mgh.harvard.edu <mailto:fis...@nmr.mgh.harvard.edu>> >> > > <mailto:fis...@nmr.mgh.harvard.edu >> <mailto:fis...@nmr.mgh.harvard.edu> >> <mailto:fis...@nmr.mgh.harvard.edu <mailto:fis...@nmr.mgh.harvard.edu>>>> >> > > >> <mailto:fis...@nmr.mgh.harvard.edu >> <mailto:fis...@nmr.mgh.harvard.edu> >> > <mailto:fis...@nmr.mgh.harvard.edu >> <mailto:fis...@nmr.mgh.harvard.edu>> >> <mailto:fis...@nmr.mgh.harvard.edu <mailto:fis...@nmr.mgh.harvard.edu> >> > <mailto:fis...@nmr.mgh.harvard.edu >> <mailto:fis...@nmr.mgh.harvard.edu>>>> >> > > >> *To:* Leon <leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>>>> >> > > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>>>> >> > > >> *Cc:* FreeSurfer <freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>>>> >> > > >> <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> > <mailto:freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu>>>> >> > > >> *Sent:* Friday, June 1, 2012 8:02 PM >> > > >> *Subject:* Re: [Freesurfer] missing ROI when using >> mri_label2vol to >> > > >> transfer ic2.tri >> > > >> >> > > >> Can you send us your command lines and screen output? >> > > >> >> > > >> >> > > >> >> > > >> On Jun 1, 2012, at 7:44 PM, Leon <leonad...@yahoo.com >> <mailto:leonad...@yahoo.com> >> > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>>> >> > > >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>> >> > <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com> >> <mailto:leonad...@yahoo.com <mailto:leonad...@yahoo.com>>>>> wrote: >> > > >> >> > > >>> Hi, folks >> > > >>> >> > > >>> when I transferred the annotation file obtained using >> > > >>> mri_make_face_parcellation based on ic2 (162 labels) to a volume >> > > >>> file using mri_label2vol, I found that one ROI patch was >> missing in >> > > >>> the volume file (see attached). I searched archives and the >> closest >> > > >>> thread I could found is that somebody reported an ROI with >> the last >> > > >>> index was missing in the mgz file after they were transferred >> from >> > > >>> the annotation file to the volume file. >> > > >>> >> > > >>> Could someone help on this? If this happens to be a bug, is there >> > > >>> any other strategy that will allow me to get a GM/WM ribbon >> without >> > > >>> a hole on it? >> > > >>> >> > > >>> Many thanks in advance >> > > >>> Leon >> > > >>> <MissingROI.jpg> >> > > >>> _______________________________________________ >> > > >>> Freesurfer mailing list >> > > >>> Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> >> > > >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > >> >> > > >> _______________________________________________ >> > > >> Freesurfer mailing list >> > > >> Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> >> > > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > >> >> > > >> >> > > >> The information in this e-mail is intended only for the person to >> > > >> whom it is >> > > >> addressed. If you believe this e-mail was sent to you in error and >> > > >> the e-mail >> > > >> contains patient information, please contact the Partners >> Compliance >> > > >> HelpLine at >> > > >> http://www.partners.org/complianceline . If the e-mail was sent to >> > > >> you in error >> > > >> but does not contain patient information, please contact the >> sender >> > > >> and properly >> > > >> dispose of the e-mail. >> > > >> >> > > >> >> > > >> >> > > >> >> > > >> _______________________________________________ >> > > >> Freesurfer mailing list >> > > >> Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> >> > > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > > >> > > > _______________________________________________ >> > > > Freesurfer mailing list >> > > > Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> >> > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > > >> > > > >> > > > The information in this e-mail is intended only for the person >> to whom >> > > > it is >> > > > addressed. If you believe this e-mail was sent to you in error >> and the >> > > > e-mail >> > > > contains patient information, please contact the Partners >> Compliance >> > > > HelpLine at >> > > > http://www.partners.org/complianceline . If the e-mail was sent >> to you >> > > > in error >> > > > but does not contain patient information, please contact the sender >> > > > and properly >> > > > dispose of the e-mail. >> > > > >> > > > >> > > >> > > -- >> > > Douglas N. Greve, Ph.D. >> > > MGH-NMR Center >> > > gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> >> <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> >> > <mailto:gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu> <mailto:gr...@nmr.mgh.harvard.edu >> <mailto:gr...@nmr.mgh.harvard.edu>>> >> > > Phone Number: 617-724-2358 >> > > Fax: 617-726-7422 >> > > >> > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> > > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> > > >> > > _______________________________________________ >> > > Freesurfer mailing list >> > > Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> > <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>>> >> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > > >> > > >> > >> > -- >> > Douglas N. Greve, Ph.D. >> > MGH-NMR Center >> > gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> >> <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> >> > Phone Number: 617-724-2358 >> > Fax: 617-726-7422 >> > >> > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > >> > >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> <mailto:Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu>> >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> > >> > >> > The information in this e-mail is intended only for the person to whom >> > it is >> > addressed. If you believe this e-mail was sent to you in error and the >> > e-mail >> > contains patient information, please contact the Partners Compliance >> > HelpLine at >> > http://www.partners.org/complianceline . If the e-mail was sent to you >> > in error >> > but does not contain patient information, please contact the sender >> > and properly >> > dispose of the e-mail. >> > >> > >> > >> > >> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to >> whom it is >> addressed. If you believe this e-mail was sent to you in error and >> the e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to >> you in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> >> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom > it is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you > in error > but does not contain patient information, please contact the sender > and properly > dispose of the e-mail. > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
