but the volume needs to be in the subjects's mri dir. Alternatively, you can use -f to path to it directly. That is:
tkmedit f- Desktop/test/sub1/vol1.mgz cheers, Bruce On Tue, 17 Nov 2009, Douglas N Greve wrote: > You should not use the -f option with the subject/volume option. Try > using -aux instead. > > Rajagopalan, Venkateswaran wrote: >> >> Hello, >> >> I am new to freesurfer, i having the following problem. I placed my >> subject's data in folder "Desktop/test/sub1/vol1.mgz". I used "tkmedit >> sub1 vol1 -f $bme/home..Desktop/test" the following command to open >> and view my image and i get the following error " bme undefined >> variable. What is the mistake i am doing here. How can i access the >> folders created in Desktop since i don't have privileges to create or >> access folders in Freesurfer directory as my freesurfer runs from the >> server. >> >> Thanks >> >> venkateswaran >> >> =================================== >> >> P Please consider the environment before printing this e-mail >> >> >> >> Cleveland Clinic is ranked one of the top hospitals >> in America by U.S.News & World Report (2009). >> Visit us online at http://www.clevelandclinic.org for >> a complete listing of our services, staff and >> locations. >> >> >> Confidentiality Note: This message is intended for use >> only by the individual or entity to which it is addressed >> and may contain information that is privileged, >> confidential, and exempt from disclosure under applicable >> law. If the reader of this message is not the intended >> recipient or the employee or agent responsible for >> delivering the message to the intended recipient, you are >> hereby notified that any dissemination, distribution or >> copying of this communication is strictly prohibited. If >> you have received this communication in error, please >> contact the sender immediately and destroy the material in >> its entirety, whether electronic or hard copy. Thank you. >> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
