Nathan, Can you send me the recon-all.log file for that subject? Its found in the <subjid>/scripts dir.
Nick On Fri, 2009-02-13 at 15:15 -0500, Dankner, Nathan (NIH/NIMH) [F] wrote: > Sorry to post this again, but I am still having issues with surfaces exiting > with errors. These are the two outputs that I have gotten: > > MRI_fill: could not read segmentation from aseg.auto_noCC.mgz > reading segmented volume aseg.auto_noCCseg.mgz... > ERROR: cannot find [subject path]/aseg.auto_noCCseg.mgz > No such file or directory > > and > > ERROR: cannot find [subject path]/mri/aseg.mgz > > Mr. Schmansky indicated that this may be due to 2 different versions being > used. I have been running recon-all on version 4.1.0 on a 64 bit linux > machine, and editing on the same version but on a mac. Also, I attempted to > use the -clean-aseg command as directed, but this doesn't seem to have fixed > the problem. I'm currently in the process of updating both machines to > version 4.2.0, so I don't know how this will affect things. Any suggestions? > Thanks in advance, > > Nathan > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
