then you didn't fix it properly. Did you find the source of the defect?
This is kind of an acquired skill as you have to page through a number of
slices almost by definition, and sometimes need to look in different
orientations. If you point us at the data (and the voxel coords of the
problem) we'll take a look.
cheers,
Bruce
On Mon, 22 Sep 2008 [EMAIL PROTECTED] wrote:
Thanks Bruce. But what happens when I've already done the manual edit, run
autorecon2-wm and still see the defect?
Hi Dahlia,
this usually means there was a topological defect that was fixed
incorrectly. You'll need to edit the wm.mgz to remove it, then run
autorecon2-wm.
cheers,
Bruce
On Mon, 22 Sep
2008 [EMAIL PROTECTED] wrote:
Hi,
What should I do when the white volume looks right (e.g. filled in where
needed) but the white surface doesn't follow the boundary of the volume?
I've done recon-all with autorecon2-wm and autorecon3.
Thanks!
Dahlia.
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