I think it is another case of out-of-date scripts
I've put new versions of these scripts
make_average_subject make_average_surface make_average_volume
here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
doug
Furlong, Carolyn wrote:
Hi,
I'm still having problems with make_average_subject, when I type the
folowing command line in:
>make_average_subject --debug --subjects 'subject1' 'subject2'.....
--out PLP_average --no-symlink
echo ERROR: Flag $flag unrecognized.
echo ERROR: Flag --no-symlink unrecognized.
ERROR: Flag --no-symlink unrecognized.
echo $cmdline
echo .......
exit 1
exit 1
and when I try to view the results by
> tksurfer PLP_average lh inflated
I get the message:
surfer: current subjects dir: /disc2/Kate/Flatmap1
surfer: not in "scripts" dir ==> using cwd for session root
surfer: session root data dir ($session) set to:
surfer: /disc2/Kate/Flatmap1
surfer: ### Could not find anatomical header information.
The mri folder does not contain the same files that the tutorial
example subject 'buckner fsaverage' does, what do you think is going
wrong? Thanks for your help
Best wishes
Carolyn
------------------------------------------------------------------------
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
