Hi,
I'm trying to get the anatomical statistics for a new parcellation, ?
h.aparc.splitcingulate.annot, I've created using
mris_divide_parcellation. I've tried using mris_anatomical_stats
with various argument structures (specifying output filenames, not
specifiying output filenames) and can't seem to get it to write a ?
h.aparc.splitcingulate.stats file.
It generates and outputs summary statistics, but it does not write
a .stats file to the stats directory:
[catemac:freesurfer/subjects/reruns] cate% mris_anatomical_stats
mm103184 lh inflated -a mm103184/label/lh.aparc.splitcingulate.annot
reading volume /Applications/freesurfer/subjects/reruns/mm103184/mri/
wm.mgz...
reading input surface /Applications/freesurfer/subjects/reruns/
mm103184/surf/lh.inflated...
reading input surface /Applications/freesurfer/subjects/reruns/
mm103184/surf/lh.pial...
reading input surface /Applications/freesurfer/subjects/reruns/
mm103184/surf/lh.white...
done.
computing second fundamental form... ... done.
total white matter volume = 516178 mm^3
total surface area = 81462 mm^2
total gray matter volume = 230187 mm^3
average cortical thickness = 2.175 mm +- 0.836 mm
average integrated rectified mean curvature = 0.025
average integrated rectified Gaussian curvature = 0.096
folding index = 9766.477
intrinsic curvature index = 937.896
[catemac:freesurfer/subjects/reruns] cate%
Thanks for your help!
-Cate
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