I, personally, still don't completely understand the entire unix/X cut buffer system. First, there is more than one cut buffer, but I doubt that that's your problem. Second, there is select-to-copy and select+right click.../ctrl+c/... to copy. These use two different
X11 cut&paste is a mess.. the OP might try to use xclipboard as an intermediate target. It often works, when two programs use different mechanisms for selections.
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