I would try moving the patch file elsewhere (or deleting it) and trying again.
That worked; thanks.
Odd, I find no such file as patch-p11-kit-modules.c here (9.0-BETA3-amd64),
either in /usr/ports/distfiles/ or in /usr/ports/security/p11-kit/files/.
It was in /usr/ports/security/p11-kit/files:
# cat /tmp/patch-p11-kit-modules.c
--- p11-kit/modules.c.orig 2011-09-15 18:15:24.000000000 -0700
+++ p11-kit/modules.c 2011-09-15 18:16:27.000000000 -0700
@@ -50,11 +50,12 @@
#include <dirent.h>
#include <dlfcn.h>
#include <errno.h>
+#include <limits.h>
#include <pthread.h>
#include <stdarg.h>
#include <stddef.h>
-#include <stdlib.h>
#include <stdio.h>
+#include <stdlib.h>
#include <string.h>
#include <unistd.h>
#
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