Hi Porters
Thank you for support us!!!
I am having problems to install the almost newest (the newest is molden4.6)
molden to FreeBSD5.5-p#15.
The compilation log file is attched in this email.
I think it is important to say: I updated to newest Xorg (xorg-7.2) last week.
Older molden versions compiled
under XF86 are still running, but not the 4.5 version
Thanks for you attention
Yours
Eduardo
ps.: by the way:
laplace /home/edulsa> uname -a
FreeBSD laplace.quimica.ufpr.br 5.5-RELEASE-p15 FreeBSD 5.5-RELEASE-p15 #0: Fri
Aug 3 15:39:48 BRT 2007 [EMAIL
PROTECTED]:/usr/src/sys/i386/compile/MYKERNEL i386
% laplace /home/edulsa>
--
Eduardo Lemos de Sa
Associated Professor at Chemistry Department
Universidade Federal do Parana
Dep. Quimica, P. Box 19081, 81531-990 Curitiba PR / Brazil
phone: +55(41)33613300
fax : +55(41)33613186
===> Cleaning for molden-4.5_1
===> Vulnerability check disabled, database not found
===> Extracting for molden-4.5_1
=> MD5 Checksum OK for molden-4.5_1/molden4.5.tar.Z.
=> SHA256 Checksum OK for molden-4.5_1/molden4.5.tar.Z.
===> Patching for molden-4.5_1
===> Applying FreeBSD patches for molden-4.5_1
/usr/bin/sed -i.bak -e 's,malloc.h,stdlib.h,'
/usr2/ports/biology/molden/work/molden4.5/xwin.c
===> molden-4.5_1 depends on executable: gfortran42 - found
===> molden-4.5_1 depends on file: /usr/local/libdata/xorg/libraries - found
===> molden-4.5_1 depends on shared library: glut.4 - found
===> Configuring for molden-4.5_1
********************
** If you want to use a larger MOLDEN,
** edit change_parameter.sh and run it,
** before \'make build\'.
********************
===> Building for molden-4.5_1
gfortran42 -O -malign-double -c atomdens.f
gfortran42 -O -malign-double -c molden.f
gfortran42 -O -malign-double -c above.f
gfortran42 -O -malign-double -c actcal.f
gfortran42 -O -malign-double -c basprt.f
basprt.f:23.44:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Hollerith constant at (1)
basprt.f:19.23:
data namesh/3hs ,3hsp ,3hspd,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.29:
data namesh/3hs ,3hsp ,3hspd,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.35:
data namesh/3hs ,3hsp ,3hspd,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.41:
data namesh/3hs ,3hsp ,3hspd,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:19.47:
data namesh/3hs ,3hsp ,3hspd,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.23:
& 3h???,3hp ,3hd ,3h???,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.29:
& 3h???,3hp ,3hd ,3h???,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.35:
& 3h???,3hp ,3hd ,3h???,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.41:
& 3h???,3hp ,3hd ,3h???,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:20.47:
& 3h???,3hp ,3hd ,3h???,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.23:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.29:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.35:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.41:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:21.47:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.23:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.29:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.35:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.41:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:22.47:
& 3hs ,3hsp ,3hd ,3hf ,3hg ,
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.23:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.29:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.35:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.41:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
basprt.f:23.47:
& 3hs ,3hsp ,3hd ,3hf ,3hg /
1
Warning: Extension: Conversion from HOLLERITH to INTEGER(4) at (1)
gfortran42 -O -malign-double -c calc.f
gfortran42 -O -malign-double -c caldis.f
gfortran42 -O -malign-double -c calfa.f
gfortran42 -O -malign-double -c cntour.f
gfortran42 -O -malign-double -c cnvgam.f
gfortran42 -O -malign-double -c cnvgau.f
gfortran42 -O -malign-double -c convzmat.f
gfortran42 -O -malign-double -c cross.f
gfortran42 -O -malign-double -c crprod.f
gfortran42 -O -malign-double -c datin.f
gfortran42 -O -malign-double -c defpc.f
gfortran42 -O -malign-double -c defrad.f
gfortran42 -O -malign-double -c del.f
gfortran42 -O -malign-double -c denmak.f
gfortran42 -O -malign-double -c densmat.f
gfortran42 -O -malign-double -c distot.f
gfortran42 -O -malign-double -c dmat.f
gfortran42 -O -malign-double -c docent.f
gfortran42 -O -malign-double -c draw.f
gfortran42 -O -malign-double -c euler.f
gfortran42 -O -malign-double -c eulerh.f
gfortran42 -O -malign-double -c files.f
gfortran42 -O -malign-double -c fndcal.f
gfortran42 -O -malign-double -c gampoi.f
gfortran42 -O -malign-double -c gaupoi.f
gfortran42 -O -malign-double -c gaussian.f
gfortran42 -O -malign-double -c geogam.f
gfortran42 -O -malign-double -c geogau.f
gfortran42 -O -malign-double -c getmul.f
gfortran42 -O -malign-double -c getpoi.f
gfortran42 -O -malign-double -c getreal.f
gfortran42 -O -malign-double -c gmmcnv.f
gfortran42 -O -malign-double -c grdcal.f
gfortran42 -O -malign-double -c gstr.f
gfortran42 -O -malign-double -c hidedr.f
gfortran42 -O -malign-double -c impsc.f
gfortran42 -O -malign-double -c locatc.f
gfortran42 -O -malign-double -c maxmin.f
gfortran42 -O -malign-double -c mdout.f
gfortran42 -O -malign-double -c mmcnv.f
gfortran42 -O -malign-double -c mopaco.f
gfortran42 -O -malign-double -c mopin.f
gfortran42 -O -malign-double -c mulprt.f
gfortran42 -O -malign-double -c occin.f
gfortran42 -O -malign-double -c oriin.f
gfortran42 -O -malign-double -c parang.f
gfortran42 -O -malign-double -c pareul.f
gfortran42 -O -malign-double -c parfc.f
gfortran42 -O -malign-double -c parori.f
gfortran42 -O -malign-double -c parpla.f
gfortran42 -O -malign-double -c parstp.f
gfortran42 -O -malign-double -c planky.f
gfortran42 -O -malign-double -c plend.f
gfortran42 -O -malign-double -c plini.f
gfortran42 -O -malign-double -c plmol.f
gfortran42 -O -malign-double -c plotgh.f
gfortran42 -O -malign-double -c plotgr.f
plotgr.f:71.72:
if (iplot.eq.0) assign 20 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:72.72:
if (iplot.eq.1) assign 40 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:73.72:
if (iplot.eq.2) assign 60 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:74.72:
if (iplot.eq.4) assign 100 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:76.72:
if (iplot.eq.0) assign 10 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:77.72:
if (iplot.eq.1) assign 30 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:78.72:
if (iplot.eq.2) assign 50 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:79.72:
if (iplot.eq.4) assign 90 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
plotgr.f:81.47:
if (iplot.eq.0.or.iplot.eq.1) write(iun4,istmnt)dx,dy
1
Warning: Obsolete: ASSIGNED variable in FORMAT tag at (1)
plotgr.f:83.19:
write(iun4,istmnt)char(27),int(dx*389),int(dy*389)
1
Warning: Obsolete: ASSIGNED variable in FORMAT tag at (1)
plotgr.f:120.19:
write(iun4,istmnt)int(dx*2000),int(dy*2000)+125
1
Warning: Obsolete: ASSIGNED variable in FORMAT tag at (1)
gfortran42 -O -malign-double -c plotin.f
gfortran42 -O -malign-double -c plpost.f
gfortran42 -O -malign-double -c prev.f
gfortran42 -O -malign-double -c proato.f
gfortran42 -O -malign-double -c procnv.f
gfortran42 -O -malign-double -c progeo.f
gfortran42 -O -malign-double -c rdbas.f
gfortran42 -O -malign-double -c rdcor.f
gfortran42 -O -malign-double -c rdgam.f
gfortran42 -O -malign-double -c rdgaus.f
gfortran42 -O -malign-double -c rdinfo.f
gfortran42 -O -malign-double -c rdpdb.f
gfortran42 -O -malign-double -c rdvect.f
gfortran42 -O -malign-double -c reada.f
gfortran42 -O -malign-double -c readel.f
gfortran42 -O -malign-double -c readvv.f
gfortran42 -O -malign-double -c renorm.f
gfortran42 -O -malign-double -c rmomen.f
gfortran42 -O -malign-double -c rota.f
gfortran42 -O -malign-double -c rotatg.f
gfortran42 -O -malign-double -c rotb.f
gfortran42 -O -malign-double -c rotc.f
gfortran42 -O -malign-double -c rotcor.f
gfortran42 -O -malign-double -c rotd.f
gfortran42 -O -malign-double -c rotfir.f
gfortran42 -O -malign-double -c rotm.f
gfortran42 -O -malign-double -c rotmom.f
gfortran42 -O -malign-double -c scback.f
gfortran42 -O -malign-double -c search.f
gfortran42 -O -malign-double -c searchd.f
gfortran42 -O -malign-double -c setang.f
gfortran42 -O -malign-double -c setbas.f
gfortran42 -O -malign-double -c settc.f
gfortran42 -O -malign-double -c shsort.f
gfortran42 -O -malign-double -c site.f
gfortran42 -O -malign-double -c slater.f
gfortran42 -O -malign-double -c stoc.f
gfortran42 -O -malign-double -c tessa.f
gfortran42 -O -malign-double -c tk4014.f
gfortran42 -O -malign-double -c tocap.f
gfortran42 -O -malign-double -c tocapf.f
gfortran42 -O -malign-double -c tomold.f
gfortran42 -O -malign-double -c under.f
gfortran42 -O -malign-double -c vaxdum.f
gfortran42 -O -malign-double -c vclr.f
gfortran42 -O -malign-double -c vec.f
gfortran42 -O -malign-double -c vlen.f
gfortran42 -O -malign-double -c vsc1.f
gfortran42 -O -malign-double -c wrinfo.f
gfortran42 -O -malign-double -c zread.f
gfortran42 -O -malign-double -c samino.f
gfortran42 -O -malign-double -c prtcal.f
gfortran42 -O -malign-double -c actss.f
gfortran42 -O -malign-double -c actami.f
gfortran42 -O -malign-double -c plden.f
gfortran42 -O -malign-double -c heaps.f
gfortran42 -O -malign-double -c den3d.f
gfortran42 -O -malign-double -c dencnt.f
gfortran42 -O -malign-double -c plhead.f
gfortran42 -O -malign-double -c pltab.f
gfortran42 -O -malign-double -c eucmol.f
gfortran42 -O -malign-double -c pl3dm.f
gfortran42 -O -malign-double -c plbox.f
gfortran42 -O -malign-double -c selsol.f
gfortran42 -O -malign-double -c atmd.f
gfortran42 -O -malign-double -c dolift.f
gfortran42 -O -malign-double -c spaced.f
gfortran42 -O -malign-double -c snypnt.f
gfortran42 -O -malign-double -c eulstr.f
gfortran42 -O -malign-double -c calct.f
gfortran42 -O -malign-double -c coeffs.f
gfortran42 -O -malign-double -c epint.f
gfortran42 -O -malign-double -c espot.f
gfortran42 -O -malign-double -c fcij.f
gfortran42 -O -malign-double -c fmt.f
gfortran42 -O -malign-double -c genaos.f
gfortran42 -O -malign-double -c rys.f
gfortran42 -O -malign-double -c ryspol.f
gfortran42 -O -malign-double -c rysrot.f
gfortran42 -O -malign-double -c thrcen.f
gfortran42 -O -malign-double -c twocen.f
gfortran42 -O -malign-double -c ifblen.f
gfortran42 -O -malign-double -c rott.f
gfortran42 -O -malign-double -c plmolp.f
gfortran42 -O -malign-double -c wrzmat.f
gfortran42 -O -malign-double -c rdchx.f
rdchx.f:1606.72:
assign 1070 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
rdchx.f:1609.72:
assign 1075 to istmnt
1
Warning: Obsolete: ASSIGN statement at (1)
rdchx.f:1624.19:
read(iun2,istmnt,end=1000,err=1000) (icon(i),i=1,jleft)
1
Warning: Obsolete: ASSIGNED variable in FORMAT tag at (1)
gfortran42 -O -malign-double -c obin.f
gfortran42 -O -malign-double -c pred.f
gfortran42 -O -malign-double -c gargpl.f
gfortran42 -O -malign-double -c inferr.f
gfortran42 -O -malign-double -c freqs.f
gfortran42 -O -malign-double -c getmop.f
gfortran42 -O -malign-double -c brklin.f
gfortran42 -O -malign-double -c getzm.f
gfortran42 -O -malign-double -c xyzcoo.f
gfortran42 -O -malign-double -c geomop.f
gfortran42 -O -malign-double -c dumzm.f
gfortran42 -O -malign-double -c getxyz.f
gfortran42 -O -malign-double -c espchrg.f
gfortran42 -O -malign-double -c proxim.f
gfortran42 -O -malign-double -c rdgamu.f
gfortran42 -O -malign-double -c plvrml.f
gfortran42 -O -malign-double -c molsint.f
gfortran42 -O -malign-double -c runjob.f
gfortran42 -O -malign-double -c rdmsf.f
gfortran42 -O -malign-double -c wrmsf.f
gfortran42 -O -malign-double -c rdmolf.f
gfortran42 -O -malign-double -c adf_fun.f
gfortran42 -O -malign-double -c rotpol.f
gfortran42 -O -malign-double -c extbas.f
gfortran42 -O -malign-double -c rdcpmd.f
gfortran42 -O -malign-double -c eem.f
eem.f:673.72:
10 assign 30 to next
1
Warning: Obsolete: ASSIGN statement at (1)
eem.f:678.19:
20 go to next,(30, 50, 70, 110)
1
Warning: Obsolete: Assigned GOTO statement at (1)
eem.f:680.72:
assign 50 to next
1
Warning: Obsolete: ASSIGN statement at (1)
eem.f:689.72:
assign 70 to next
1
Warning: Obsolete: ASSIGN statement at (1)
eem.f:695.72:
assign 110 to next
1
Warning: Obsolete: ASSIGN statement at (1)
gfortran42 -O -malign-double -c asspmf.f
gfortran42 -O -malign-double -c srfcal.f
gfortran42 -O -malign-double -c rdqchm.f
gfortran42 -O -malign-double -c mpdum.f
cc -O -pipe -c -DDOBACK -DHASTIMER -I/usr/local/include -malign-double -c
xwin.c
gfortran42 -o molden atomdens.o molden.o above.o actcal.o basprt.o calc.o
caldis.o calfa.o cntour.o cnvgam.o cnvgau.o convzmat.o cross.o crprod.o
datin.o defpc.o defrad.o del.o denmak.o densmat.o distot.o dmat.o docent.o
draw.o euler.o eulerh.o files.o fndcal.o gampoi.o gaupoi.o gaussian.o
geogam.o geogau.o getmul.o getpoi.o getreal.o gmmcnv.o grdcal.o gstr.o
hidedr.o impsc.o locatc.o maxmin.o mdout.o mmcnv.o mopaco.o mopin.o mulprt.o
occin.o oriin.o parang.o pareul.o parfc.o parori.o parpla.o parstp.o planky.o
plend.o plini.o plmol.o plotgh.o plotgr.o plotin.o plpost.o prev.o proato.o
procnv.o progeo.o rdbas.o rdcor.o rdgam.o rdgaus.o rdinfo.o rdpdb.o rdvect.o
reada.o readel.o readvv.o renorm.o rmomen.o rota.o rotatg.o rotb.o rotc.o
rotcor.o rotd.o rotfir.o rotm.o rotmom.o scback.o search.o searchd.o setang.o
setbas.o settc.o shsort.o site.o slater.o stoc.o tessa.o tk4014.o tocap.o
tocapf.o tomold.o under.o vaxdum.o vclr.o vec.o vlen.o vsc1.o wrinfo.o zread.o
samino.o prtcal.o actss.o actami.o plden.o heaps.o den3d.o dencnt.o plhead.o
pltab.o eucmol.o pl3dm.o plbox.o selsol.o atmd.o dolift.o spaced.o snypnt.o
eulstr.o calct.o coeffs.o epint.o espot.o fcij.o fmt.o genaos.o rys.o
ryspol.o rysrot.o thrcen.o twocen.o ifblen.o rott.o plmolp.o wrzmat.o rdchx.o
obin.o pred.o gargpl.o inferr.o freqs.o getmop.o brklin.o getzm.o xyzcoo.o
geomop.o dumzm.o getxyz.o espchrg.o proxim.o rdgamu.o plvrml.o molsint.o
runjob.o rdmsf.o wrmsf.o rdmolf.o adf_fun.o rotpol.o extbas.o rdcpmd.o eem.o
asspmf.o srfcal.o rdqchm.o mpdum.o xwin.o -L/usr/local/lib -lX11 -lm
/usr/bin/ld: molden: hidden symbol `__eprintf' in
/usr/local/lib/gcc-4.2.1/gcc/i386-portbld-freebsd5.5/4.2.1/libgcc.a(_eprintf.o)
is referenced by DSO
collect2: ld returned 1 exit status
*** Error code 1
Stop in /usr2/ports/biology/molden/work/molden4.5.
*** Error code 1
Stop in /usr2/ports/biology/molden.
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