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Maintainer: b...@freebsd.org Last committer: swi...@freebsd.org Ident: $FreeBSD: head/math/libR/Makefile 413746 2016-04-21 16:43:14Z swills $ Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p417282_s302064/logs/libR-3.3.0.log Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p417282_s302064 Log: ====>> Building math/libR build started at Tue Jun 28 15:01:05 UTC 2016 port directory: /usr/ports/math/libR building for: FreeBSD head-armv6-default-job-15 11.0-ALPHA4 FreeBSD 11.0-ALPHA4 r302064 arm maintained by: b...@freebsd.org Makefile ident: $FreeBSD: head/math/libR/Makefile 413746 2016-04-21 16:43:14Z swills $ Poudriere version: 3.1.12 Host OSVERSION: 1100113 Jail OSVERSION: 1100117 !!! Jail is newer than host. (Jail: 1100117, Host: 1100113) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o UNAME_v=FreeBSD 11.0-ALPHA4 r302064 UNAME_r=11.0-ALPHA4 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 OPSYS=FreeBSD ARCH=armv6 LINUX_OSRELEASE=2.6.32 SAVED_TERM=screen MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref QEMU_EMULATING=1 UID=0 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin _JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+ POUDRIERE_BUILD_TYPE=bulk PKGNAME=libR-3.3.0 OSREL=11.0 _OSRELEASE=11.0-ALPHA4 PYTHONBASE=/usr/local OLDPWD=/ _SMP_CPUS=24 PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool MASTERNAME=head-armv6-default SCRIPTPREFIX=/usr/local/share/poudriere _JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun USER=root HOME=/root POUDRIERE_VERSION=3.1.12 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh CONFIGURE_MAX_CMD_LEN=262144 LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes _JAVA_OS_LIST_REGEXP=native\|linux OSVERSION=1100117 ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for libR-3.3.0: ATLAS=off: Use ATLAS instead of BLAS/LAPACK DOCS=on: Build and/or install documentation ICU=on: Use ICU for collation in multibyte locales MISSING=off: use libmissing rather than libquadmath PCRE_PORT=on: Use devel/pcre instead of the bundled PCRE THREADS=on: Threading support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --enable-memory-profiling rdocdir=/usr/local/share/doc/libR --with-system-bzlib --with-system-zlib --with-blas="no" --with-lapack="no" --with-ICU --with-system-pcre --enable-threads=posix --disable-BLAS-shlib --without-pic --without-x --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- LIBR_LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" OBJC="gcc48" SED="/usr/local/bin/gsed" ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes FCFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" R_LD_LIBRARY_PATH="/usr/local/lib/gcc48:/usr/local/lib" TAR="/usr/bin/tar" SHLIB_LDFLAGS="-fpic" SHLIB_CXXLDFLAGS="-fpic" F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/libR/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/libR/work HOME=/wrkdirs/usr/ports/math/libR/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objd ump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/libR/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/libR/work HOME=/wrkdirs/usr/ports/math/libR/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="gcc48" CFLAGS="-O2 -pipe -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing" CPP="cpp48" CPPFLAGS="-I/usr/local/include -DLIBICONV_PLUG -I/usr/local/include" LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS="" CXX="g++48" CXXFLAGS="-O2 -pipe -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing -DLIBICONV_PLUG -Wl,-rpath=/usr/local/lib/gcc48" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_SOVERSION="1" RBLAS_SOVERSION="2" RLAPACK_SOVERSION="4" LAPACK="" NLS="" OSREL=11.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/libR" EXAMPLESDIR="share/examples/libR" DATADIR="share/libR" WWWDIR="www/libR" ETCDIR="etc/libR" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libR DOCSDIR=/usr/local/share/doc/libR EXAMPLESDIR=/usr/local/share/examples/libR WWWDIR=/usr/local/www/libR ETCDIR=/usr/local/etc/libR --End SUB_LIST-- ---Begin make.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc NM=/nxb-bin/usr/bin/nm MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc NM=/nxb-bin/usr/bin/nm MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc NM=/nxb-bin/usr/bin/nm MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc NM=/nxb-bin/usr/bin/nm MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf <snip> STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed READELF=/nxb-bin/usr/bin/readelf RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> libR-3.3.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.5_1.txz [head-armv6-default-job-15] Installing pkg-1.8.5_1... [head-armv6-default-job-15] Extracting pkg-1.8.5_1: .......... done ===> libR-3.3.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of libR-3.3.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by libR-3.3.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by libR-3.3.0 for building => SHA256 Checksum OK for R-3.3.0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by libR-3.3.0 for building ===> Extracting for libR-3.3.0 => SHA256 Checksum OK for R-3.3.0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for libR-3.3.0 ===> Applying FreeBSD patches for libR-3.3.0 =========================================================================== =======================<phase: build-depends >============================ ===> libR-3.3.0 depends on file: /usr/local/bin/gsed - not found ===> Installing existing package /packages/All/gsed-4.2.2.txz [head-armv6-default-job-15] Installing gsed-4.2.2... [head-armv6-default-job-15] `-- Installing indexinfo-0.2.4... [head-armv6-default-job-15] `-- Extracting indexinfo-0.2.4: .... done [head-armv6-default-job-15] `-- Installing gettext-runtime-0.19.8.1... [head-armv6-default-job-15] `-- Extracting gettext-runtime-0.19.8.1: .......... done [head-armv6-default-job-15] Extracting gsed-4.2.2: .......... done ===> libR-3.3.0 depends on file: /usr/local/bin/gsed - found ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on executable: texi2dvi - not found ===> Installing existing package /packages/All/texinfo-6.1.20160425.txz [head-armv6-default-job-15] Installing texinfo-6.1.20160425... [head-armv6-default-job-15] `-- Installing perl5-5.20.3_13... [head-armv6-default-job-15] `-- Extracting perl5-5.20.3_13: .......... done [head-armv6-default-job-15] Extracting texinfo-6.1.20160425: .......... done Message from perl5-5.20.3_13: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. ===> libR-3.3.0 depends on executable: texi2dvi - found ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on executable: gfortran48 - not found ===> Installing existing package /packages/All/gcc-4.8.5_2.txz [head-armv6-default-job-15] Installing gcc-4.8.5_2... [head-armv6-default-job-15] `-- Installing mpc-1.0.3... [head-armv6-default-job-15] | `-- Installing gmp-5.1.3_3... [head-armv6-default-job-15] | `-- Extracting gmp-5.1.3_3: .......... done [head-armv6-default-job-15] | `-- Installing mpfr-3.1.4... [head-armv6-default-job-15] | `-- Extracting mpfr-3.1.4: .......... done [head-armv6-default-job-15] `-- Extracting mpc-1.0.3: ...... done [head-armv6-default-job-15] `-- Installing binutils-2.25.1_3,1... [head-armv6-default-job-15] `-- Extracting binutils-2.25.1_3,1: .......... done [head-armv6-default-job-15] Extracting gcc-4.8.5_2: .......... done Message from gcc-4.8.5_2: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc48 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> libR-3.3.0 depends on executable: gfortran48 - found ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on executable: msgfmt - not found ===> Installing existing package /packages/All/gettext-tools-0.19.8.1.txz [head-armv6-default-job-15] Installing gettext-tools-0.19.8.1... [head-armv6-default-job-15] Extracting gettext-tools-0.19.8.1: .......... done ===> libR-3.3.0 depends on executable: msgfmt - found ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on executable: gcc48 - found ===> libR-3.3.0 depends on file: /usr/local/bin/as - found =========================================================================== =======================<phase: lib-depends >============================ ===> libR-3.3.0 depends on shared library: libcurl.so - not found ===> Installing existing package /packages/All/curl-7.49.0.txz [head-armv6-default-job-15] Installing curl-7.49.0... [head-armv6-default-job-15] `-- Installing ca_root_nss-3.22.2... [head-armv6-default-job-15] `-- Extracting ca_root_nss-3.22.2: ....... done [head-armv6-default-job-15] Extracting curl-7.49.0: .......... done Message from ca_root_nss-3.22.2: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> libR-3.3.0 depends on shared library: libcurl.so - found (/usr/local/lib/libcurl.so) ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on shared library: libicui18n.so - not found ===> Installing existing package /packages/All/icu-55.1.txz [head-armv6-default-job-15] Installing icu-55.1... [head-armv6-default-job-15] Extracting icu-55.1: .......... done ===> libR-3.3.0 depends on shared library: libicui18n.so - found (/usr/local/lib/libicui18n.so) ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on shared library: libpcre.so - not found ===> Installing existing package /packages/All/pcre-8.38_1.txz [head-armv6-default-job-15] Installing pcre-8.38_1... [head-armv6-default-job-15] Extracting pcre-8.38_1: .......... done ===> libR-3.3.0 depends on shared library: libpcre.so - found (/usr/local/lib/libpcre.so) ===> Returning to build of libR-3.3.0 ===> libR-3.3.0 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) ===> libR-3.3.0 depends on shared library: libreadline.so.6 - not found ===> Installing existing package /packages/All/readline-6.3.8.txz [head-armv6-default-job-15] Installing readline-6.3.8... [head-armv6-default-job-15] Extracting readline-6.3.8: .......... done ===> libR-3.3.0 depends on shared library: libreadline.so.6 - found (/usr/local/lib/libreadline.so.6) ===> Returning to build of libR-3.3.0 =========================================================================== =======================<phase: configure >============================ ===> Configuring for libR-3.3.0 libquadmath is not available for your compiler and architecture: please enable the MISSING option. *** Error code 1 Stop. make: stopped in /usr/ports/math/libR _______________________________________________ freebsd-pkg-fallout@freebsd.org mailing list https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout To unsubscribe, send any mail to "freebsd-pkg-fallout-unsubscr...@freebsd.org"
