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Maintainer: po...@freebsd.org Last committer: amd...@freebsd.org Ident: $FreeBSD: head/math/rpy/Makefile 415844 2016-05-25 16:13:35Z amdmi3 $ Log URL: http://package19.nyi.freebsd.org/data/103i386-default-build-as-user/417507/logs/rpy-1.0.3_35.log Build URL: http://package19.nyi.freebsd.org/build.html?mastername=103i386-default-build-as-user&build=417507 Log: ====>> Building math/rpy build started at Sun Jun 26 18:52:30 UTC 2016 port directory: /usr/ports/math/rpy building for: FreeBSD 103i386-default-build-as-user-job-04 10.3-RELEASE-p5 FreeBSD 10.3-RELEASE-p5 i386 maintained by: po...@freebsd.org Makefile ident: $FreeBSD: head/math/rpy/Makefile 415844 2016-05-25 16:13:35Z amdmi3 $ Poudriere version: 3.1.14 Host OSVERSION: 1100109 Jail OSVERSION: 1003000 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 UNAME_v=FreeBSD 10.3-RELEASE-p5 UNAME_r=10.3-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 OPSYS=FreeBSD ARCH=i386 LINUX_OSRELEASE=2.6.32 SAVED_TERM= MASTERMNT=/poudriere/data/.m/103i386-default-build-as-user/ref FORCE_PACKAGE=yes PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin _JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+ POUDRIERE_BUILD_TYPE=bulk PKGNAME=rpy-1.0.3_35 OSREL=10.3 _OSRELEASE=10.3-RELEASE-p5 PYTHONBASE=/usr/local OLDPWD=/ _SMP_CPUS=32 PWD=/poudriere/data/.m/103i386-default-build-as-user/ref/.p/pool MASTERNAME=103i386-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere _JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun USER=root HOME=/root POUDRIERE_VERSION=3.1.14 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh CONFIGURE_MAX_CMD_LEN=262144 LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local PACKAGE_BUILDING=yes _JAVA_OS_LIST_REGEXP=native\|linux OSVERSION=1003000 ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/math/rpy/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/rpy/work HOME=/wrkdirs/usr/ports/math/rpy/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/rpy/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/rpy/work HOME=/wrkdirs/usr/ports/math/rpy/work TMPDIR="/tmp" NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib/R/modules -L/usr/local/lib/R/lib -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 444" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd10 PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_VER=2.7 PYTHON_VERSION=python2.7 OSREL=10.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/rpy" EXAMPLESDIR="share/examples/rpy" DATADIR="share/rpy" WWWDIR="www/rpy" ETCDIR="etc/rpy" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rpy DOCSDIR=/usr/local/share/doc/rpy EXAMPLESDIR=/usr/local/share/examples/rpy WWWDIR=/usr/local/www/rpy ETCDIR=/usr/local/etc/rpy --End SUB_LIST-- ---Begin make.conf--- MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =======================<phase: check-sanity >============================ ===> NOTICE: The rpy port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 LGPL21 MPL accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> rpy-1.0.3_35 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.8.6.txz [103i386-default-build-as-user-job-04] Installing pkg-1.8.6... [103i386-default-build-as-user-job-04] Extracting pkg-1.8.6: .......... done ===> rpy-1.0.3_35 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of rpy-1.0.3_35 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> NOTICE: The rpy port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 LGPL21 MPL accepted by the user ===> Fetching all distfiles required by rpy-1.0.3_35 for building =========================================================================== =======================<phase: checksum >============================ ===> NOTICE: The rpy port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 LGPL21 MPL accepted by the user ===> Fetching all distfiles required by rpy-1.0.3_35 for building => SHA256 Checksum OK for rpy-1.0.3.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> NOTICE: The rpy port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port ===> License GPLv2 LGPL21 MPL accepted by the user ===> Fetching all distfiles required by rpy-1.0.3_35 for building ===> Extracting for rpy-1.0.3_35 => SHA256 Checksum OK for rpy-1.0.3.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for rpy-1.0.3_35 ===> Applying FreeBSD patches for rpy-1.0.3_35 =========================================================================== =======================<phase: build-depends >============================ ===> rpy-1.0.3_35 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Installing existing package /packages/All/py27-numpy-1.11.0,1.txz [103i386-default-build-as-user-job-04] Installing py27-numpy-1.11.0,1... [103i386-default-build-as-user-job-04] `-- Installing python27-2.7.11_3... <snip> [103i386-default-build-as-user-job-04] | | | `-- Extracting pcre-8.38_1: .......... done [103i386-default-build-as-user-job-04] | | `-- Extracting glib-2.46.2: .......... done No schema files found: doing nothing. [103i386-default-build-as-user-job-04] | | `-- Extracting cairo-1.14.6,2: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing icu-55.1... [103i386-default-build-as-user-job-04] | | `-- Extracting icu-55.1: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing graphite2-1.3.8... [103i386-default-build-as-user-job-04] | | `-- Extracting graphite2-1.3.8: .......... done [103i386-default-build-as-user-job-04] | `-- Extracting harfbuzz-1.2.3: .......... done [103i386-default-build-as-user-job-04] | `-- Installing xorg-fonts-truetype-7.7_1... [103i386-default-build-as-user-job-04] | | `-- Installing font-misc-meltho-1.0.3_3... [103i386-default-build-as-user-job-04] | | `-- Installing mkfontdir-1.0.7... [103i386-default-build-as-user-job-04] | | | `-- Installing mkfontscale-1.1.2... [103i386-default-build-as-user-job-04] | | | `-- Installing libfontenc-1.1.3... [103i386-default-build-as-user-job-04] | | | `-- Extracting libfontenc-1.1.3: ...... done [103i386-default-build-as-user-job-04] | | | `-- Extracting mkfontscale-1.1.2: .. done [103i386-default-build-as-user-job-04] | | `-- Extracting mkfontdir-1.0.7: .. done [103i386-default-build-as-user-job-04] | | `-- Extracting font-misc-meltho-1.0.3_3: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing font-bh-ttf-1.0.3_3... [103i386-default-build-as-user-job-04] | | `-- Extracting font-bh-ttf-1.0.3_3: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing font-misc-ethiopic-1.0.3_3... [103i386-default-build-as-user-job-04] | | `-- Extracting font-misc-ethiopic-1.0.3_3: ... done [103i386-default-build-as-user-job-04] | | `-- Installing dejavu-2.35... [103i386-default-build-as-user-job-04] | | `-- Extracting dejavu-2.35: .......... done [103i386-default-build-as-user-job-04] `-- Extracting pango-1.38.0_1: .......... done [103i386-default-build-as-user-job-04] `-- Installing gsed-4.2.2... [103i386-default-build-as-user-job-04] `-- Extracting gsed-4.2.2: .......... done [103i386-default-build-as-user-job-04] `-- Installing curl-7.49.0... [103i386-default-build-as-user-job-04] | `-- Installing ca_root_nss-3.25... [103i386-default-build-as-user-job-04] | `-- Extracting ca_root_nss-3.25: ....... done [103i386-default-build-as-user-job-04] `-- Extracting curl-7.49.0: .......... done [103i386-default-build-as-user-job-04] `-- Installing ghostscript9-agpl-base-9.16_5... [103i386-default-build-as-user-job-04] | `-- Installing jbig2dec-0.13... [103i386-default-build-as-user-job-04] | `-- Extracting jbig2dec-0.13: .......... done [103i386-default-build-as-user-job-04] | `-- Installing libpaper-1.1.24.4... [103i386-default-build-as-user-job-04] | `-- Extracting libpaper-1.1.24.4: .......... done [103i386-default-build-as-user-job-04] | `-- Installing svgalib-1.4.3_7... [103i386-default-build-as-user-job-04] | `-- Extracting svgalib-1.4.3_7: .......... done [103i386-default-build-as-user-job-04] | `-- Installing libidn-1.31... [103i386-default-build-as-user-job-04] | `-- Extracting libidn-1.31: .......... done [103i386-default-build-as-user-job-04] | `-- Installing cups-2.1.4... [103i386-default-build-as-user-job-04] | | `-- Installing avahi-app-0.6.31_5... [103i386-default-build-as-user-job-04] | | `-- Installing gnome_subr-1.0... [103i386-default-build-as-user-job-04] | | `-- Extracting gnome_subr-1.0: . done [103i386-default-build-as-user-job-04] | | `-- Installing gobject-introspection-1.46.0... [103i386-default-build-as-user-job-04] | | | `-- Installing python2-2_3... [103i386-default-build-as-user-job-04] | | | `-- Extracting python2-2_3: ...... done [103i386-default-build-as-user-job-04] | | `-- Extracting gobject-introspection-1.46.0: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing gdbm-1.12... [103i386-default-build-as-user-job-04] | | `-- Extracting gdbm-1.12: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing libdaemon-0.14_1... [103i386-default-build-as-user-job-04] | | `-- Extracting libdaemon-0.14_1: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing dbus-glib-0.104... [103i386-default-build-as-user-job-04] | | | `-- Installing dbus-1.8.20... ===> Creating groups. Creating group 'messagebus' with gid '556'. ===> Creating users Creating user 'messagebus' with uid '556'. [103i386-default-build-as-user-job-04] | | | `-- Extracting dbus-1.8.20: ......... done [103i386-default-build-as-user-job-04] | | `-- Extracting dbus-glib-0.104: .......... done ===> Creating groups. Creating group 'avahi' with gid '558'. ===> Creating users Creating user 'avahi' with uid '558'. [103i386-default-build-as-user-job-04] | | `-- Extracting avahi-app-0.6.31_5: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing gnutls-3.4.13... [103i386-default-build-as-user-job-04] | | `-- Installing nettle-3.2... [103i386-default-build-as-user-job-04] | | `-- Extracting nettle-3.2: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing libtasn1-4.8... [103i386-default-build-as-user-job-04] | | `-- Extracting libtasn1-4.8: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing trousers-0.3.13... [103i386-default-build-as-user-job-04] | | | `-- Installing tpm-emulator-0.7.4_1... ===> Creating groups. Creating group '_tss' with gid '601'. ===> Creating users Creating user '_tss' with uid '601'. [103i386-default-build-as-user-job-04] | | | `-- Extracting tpm-emulator-0.7.4_1: ......... done ===> Creating groups. Using existing group '_tss'. ===> Creating users Using existing user '_tss'. [103i386-default-build-as-user-job-04] | | `-- Extracting trousers-0.3.13: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing p11-kit-0.23.2... [103i386-default-build-as-user-job-04] | | `-- Extracting p11-kit-0.23.2: .......... done [103i386-default-build-as-user-job-04] | | `-- Extracting gnutls-3.4.13: .......... done ===> Creating groups. Creating group 'cups' with gid '193'. ===> Creating users Creating user 'cups' with uid '193'. [103i386-default-build-as-user-job-04] | `-- Extracting cups-2.1.4: .......... done [103i386-default-build-as-user-job-04] | `-- Installing lcms2-2.7_2... [103i386-default-build-as-user-job-04] | | `-- Installing jpeg-turbo-1.4.2... [103i386-default-build-as-user-job-04] | | `-- Extracting jpeg-turbo-1.4.2: .......... done [103i386-default-build-as-user-job-04] | | `-- Installing tiff-4.0.6_1... [103i386-default-build-as-user-job-04] | | `-- Installing jbigkit-2.1_1... [103i386-default-build-as-user-job-04] | | `-- Extracting jbigkit-2.1_1: .......... done [103i386-default-build-as-user-job-04] | | `-- Extracting tiff-4.0.6_1: .......... done [103i386-default-build-as-user-job-04] | `-- Extracting lcms2-2.7_2: .......... done [103i386-default-build-as-user-job-04] | `-- Installing gsfonts-8.11_6... [103i386-default-build-as-user-job-04] | `-- Extracting gsfonts-8.11_6: .......... done [103i386-default-build-as-user-job-04] `-- Extracting ghostscript9-agpl-base-9.16_5: .......... done [103i386-default-build-as-user-job-04] `-- Installing libXScrnSaver-1.2.2_3... [103i386-default-build-as-user-job-04] | `-- Installing scrnsaverproto-1.2.2... [103i386-default-build-as-user-job-04] | `-- Extracting scrnsaverproto-1.2.2: ... done [103i386-default-build-as-user-job-04] `-- Extracting libXScrnSaver-1.2.2_3: .......... done [103i386-default-build-as-user-job-04] `-- Installing tk86-8.6.5... [103i386-default-build-as-user-job-04] | `-- Installing tcl86-8.6.5_1... [103i386-default-build-as-user-job-04] | `-- Extracting tcl86-8.6.5_1: .......... done [103i386-default-build-as-user-job-04] `-- Extracting tk86-8.6.5: .......... done [103i386-default-build-as-user-job-04] `-- Installing libXmu-1.1.2_3,1... [103i386-default-build-as-user-job-04] `-- Extracting libXmu-1.1.2_3,1: .......... done [103i386-default-build-as-user-job-04] Extracting R-3.3.0_1: .......... done ldconfig: warning: /usr/local/lib/R/lib: No such file or directory Message from perl5-5.20.3_13: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Message from dejavu-2.35: Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. Message from ca_root_nss-3.25: ********************************* WARNING ********************************* FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** Message from trousers-0.3.13: To run tcsd automatically, add the following line to /etc/rc.conf: tcsd_enable="YES" You might want to edit /usr/local/etc/tcsd.conf to reflect your setup. If you want to use tcsd with software TPM emulator, use the following configuration in /etc/rc.conf: tcsd_enable="YES" tcsd_mode="emulator" tpmd_enable="YES" To use TPM, add your_account to '_tss' group like following: # pw groupadd _tss -m your_account Message from ghostscript9-agpl-base-9.16_5: Note: in order to use the script "dvipdf", dvips must be installed. This program is provided by another package print/tex-dvipsk. FAPIfontmap and FAPIcidfmap in /usr/local/share/ghostscript/9.16/Resource/Init have to be configured if you want to use FAPI feature. ===> rpy-1.0.3_35 depends on executable: R - found ===> Returning to build of rpy-1.0.3_35 ===> rpy-1.0.3_35 depends on package: py27-setuptools27>0 - found ===> rpy-1.0.3_35 depends on file: /usr/local/bin/python2.7 - found =========================================================================== =======================<phase: lib-depends >============================ =========================================================================== =======================<phase: configure >============================ ===> Configuring for rpy-1.0.3_35 ==> rpy-1.0.3_35 requires math/R to be built WITH_LIBR *** Error code 1 Stop. make: stopped in /usr/ports/math/rpy _______________________________________________ freebsd-pkg-fallout@freebsd.org mailing list https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout To unsubscribe, send any mail to "freebsd-pkg-fallout-unsubscr...@freebsd.org"
