You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build.
Maintainer: y...@freebsd.org Log URL: https://pkg-status.freebsd.org/beefy15/data/132i386-default/3905913943f0/logs/tinker-8.11.2_3.log Build URL: https://pkg-status.freebsd.org/beefy15/build.html?mastername=132i386-default&build=3905913943f0 Log: =>> Building science/tinker build started at Fri Jun 7 11:46:49 UTC 2024 port directory: /usr/ports/science/tinker package name: tinker-8.11.2_3 building for: FreeBSD 132i386-default-job-12 13.2-RELEASE-p11 FreeBSD 13.2-RELEASE-p11 i386 maintained by: y...@freebsd.org Makefile datestamp: -rw-r--r-- 1 root wheel 2732 May 21 01:01 /usr/ports/science/tinker/Makefile Ports top last git commit: 3905913943f Ports top unclean checkout: no Port dir last git commit: b079e7a87c8 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-30-g79e3edcd Host OSVERSION: 1500018 Jail OSVERSION: 1302001 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 OSVERSION=1302001 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 UNAME_m=i386 UNAME_p=i386 UNAME_r=13.2-RELEASE-p11 LOCALBASE=/usr/local UNAME_v=FreeBSD 13.2-RELEASE-p11 USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-30-g79e3edcd MASTERMNT=/usr/local/poudriere/data/.m/132i386-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/132i386-default/12/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=132i386-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/132i386-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-30-g79e3edcd SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for tinker-8.11.2_3: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples NATIVE=off: Use native optimization (-march=native) OPTIMIZED_FFLAGS=off: Fortran compilation optimizations SIMD=off: Use CPU-specific optimizations ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- y...@freebsd.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/tinker/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/tinker/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/tinker/work/.cache HOME=/wrkdirs/usr/ports/science/tinker/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/tinker/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/tinker/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- HAVE_G2C=yes F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/tinker/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/tinker/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/tinker/work/.cache HOME=/wrkdirs/usr/ports/science/tinker/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/tinker/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/tinker/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP ="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" OSREL=13.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/tinker" EXAMPLESDIR="share/examples/tinker" DATADIR="share/tinker" WWWDIR="www/tinker" ETCDIR="etc/tinker" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/tinker DOCSDIR=/usr/local/share/doc/tinker EXAMPLESDIR=/usr/local/share/examples/tinker WWWDIR=/usr/local/www/tinker ETCDIR=/usr/local/etc/tinker --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License TINKER accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> tinker-8.11.2_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.3.pkg [132i386-default-job-12] Installing pkg-1.21.3... [132i386-default-job-12] Extracting pkg-1.21.3: .......... done ===> tinker-8.11.2_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of tinker-8.11.2_3 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License TINKER accepted by the user => tinker-8.11.2.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://dasher.wustl.edu/tinker/downloads/tinker-8.11.2.tar.gz tinker-8.11.2.tar.gz 68 MB 10 MBps 06s ===> Fetching all distfiles required by tinker-8.11.2_3 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License TINKER accepted by the user ===> Fetching all distfiles required by tinker-8.11.2_3 for building => SHA256 Checksum OK for tinker-8.11.2.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License TINKER accepted by the user ===> Fetching all distfiles required by tinker-8.11.2_3 for building ===> Extracting for tinker-8.11.2_3 => SHA256 Checksum OK for tinker-8.11.2.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for tinker-8.11.2_3 ===> Applying FreeBSD patches for tinker-8.11.2_3 from /usr/ports/science/tinker/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> tinker-8.11.2_3 depends on executable: gfortran13 - not found ===> Installing existing package /packages/All/gcc13-13.2.0_4.pkg [132i386-default-job-12] Installing gcc13-13.2.0_4... [132i386-default-job-12] `-- Installing binutils-2.40_5,1... [132i386-default-job-12] | `-- Installing gettext-runtime-0.22.5... [132i386-default-job-12] | | `-- Installing indexinfo-0.3.1... [132i386-default-job-12] | | `-- Extracting indexinfo-0.3.1: .... done [132i386-default-job-12] | `-- Extracting gettext-runtime-0.22.5: .......... done [132i386-default-job-12] | `-- Installing zstd-1.5.6... [132i386-default-job-12] | | `-- Installing liblz4-1.9.4_1,1... [132i386-default-job-12] | | `-- Extracting liblz4-1.9.4_1,1: .......... done <snip> pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/linaclotide.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lipid.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lipid.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lj38.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lj38.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lysozyme.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lysozyme.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lysozyme.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/lysozyme.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/melittin.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/melittin.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/melittin.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/melittin.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/membrane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/membrane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/meohbox.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/meohbox.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/methane.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/methane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/methane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/methanol.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/methanol.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/mgwater.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/mgwater.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/mm3.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/mm3.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nacl.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nacl.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nada.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nada.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthalene.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthalene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthalene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthax.frac): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthax.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/naphthax.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrate.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrate.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrile.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrile.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrogen.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrogen.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nitrogen.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nma.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nma.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nma.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nmabox.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nmabox.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nmabox.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nmf.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nmf.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nstilbene.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nstilbene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/nstilbene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane2.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane2.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octane2.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octene.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/octene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/palmitate.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/palmitate.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/palmitate.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pentane.frac): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pentane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pentane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.make): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/peptide.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/phenanth.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/phenanth.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/photo.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/photo.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/photo.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/photo.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pol3.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pol3.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/polyala.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/polyala.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pravastatin.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pravastatin.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/prism.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/prism.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propellane.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propellane.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propellane.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propyne.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/propyne.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyridine.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyridine.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyridine.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyrrole.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyrrole.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/pyrrole.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/retinoic.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/retinoic.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ring.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ring.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/skunk.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/skunk.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/somatostatin.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/somatostatin.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/somatostatin.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/somatostatin.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/spc.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/spc.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/sterol.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/sterol.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/styrene.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/styrene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/styrene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/taxol.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/taxol.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/terphenyl.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/terphenyl.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tfe.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tfe.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiadiene.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiadiene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiadiene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiophene.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiophene.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thiophene.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thr.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thr.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/thr.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip3f.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip3f.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip3p.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip3p.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4f.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4f.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4p.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4p.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4pbox.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip4pbox.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip5p.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/tip5p.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/toradol.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/toradol.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/trpcage.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/trpcage.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/trpcage.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/trpcage.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/uamoeba.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/uamoeba.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin.pdb): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin2.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin2.seq): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/ubiquitin2.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/urea.frac): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/urea.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/urea.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/water.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/water.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/water.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterball.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterball.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterbig.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterbig.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterbox.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterbox.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterdodec.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterdodec.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterdot.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterdot.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterdot.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterglobe.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterglobe.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterhuge.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterhuge.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterslab.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterslab.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/waterslab.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watersmall.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watersmall.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watersmall.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watertiny.dyn): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watertiny.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/watertiny.xyz): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/white.int): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/white.key): No such file or directory pkg-static: lstat(/wrkdirs/usr/ports/science/tinker/work/stage/usr/local/share/examples/tinker/white.xyz): No such file or directory make: exec(/bin/sh) failed (No such file or directory) *** Error code 1 Stop. make: stopped in /usr/ports/science/tinker unlink: ../../ref/.p/var/run/12_nohang.pid: Not a directory
