*Ph.D. Assistantship- Plant Genomics, Boise State University, Idaho, USA*

GRADUATE ASSISTANTSHIP (Ph.D. in Ecology, Evolution, and Behavior) - at
Boise State University. A position is available for a Ph.D. student to use
genetics to predict resistance of plants to vertebrate herbivores in arid
and arctic ecosystems. Previous studies have shown that plants become more
resistant to herbivores after detection of volatile cues from damaged
neighbors. These studies suggest that plants communicate via the production
of volatiles, but very little is known about the genomic processes
triggering this process. The student will participate in: 1) field work
that involves collection of plant samples across Idaho, Nevada, Iceland,
and/or Norway, 2) assembly and annotation of a draft genome using
whole-genome sequencing and RNA sequencing, and 3) use of the draft genome
to investigate the cascade of gene expressions that influence the
production of secondary metabolites that deter mammalian and avian
herbivores. This goal will be achieved by leveraging existing common garden
experiments and natural field sites where RNA sequencing will be used to
look at gene expression patterns associated with manipulated or natural
gradients of damage by vertebrate herbivores. The Ph.D. student will be
supervised by Sven Buerki (Boise State University, BSU, genomics and
bioinformatics) in collaboration with Jennifer Forbey (BSU, chemical
ecology) and Trevor Caughlin (BSU, spatial ecology and modeling). The
student will also interact with our national and international network of
collaborators that includes, but is not limited to, the Bureau of Land
Management, US Geological Survey, US Forest Service, University of Nevada
Reno, the Norwegian Polar Institute, the Icelandic Institute of Natural
History, the University of Tromsø and the Natural History Museum in Geneva. The
student will conduct fieldwork, generate molecular data, conduct greenhouse
experiments and analyze data using bioinformatic methods. We expect the
student to lead the writing of several scientific papers.

 *Qualifications*

We are seeking someone who has a strong interest in genomics,
phytochemistry, ecology, and bioinformatics. Competitive students will have
a Master’s degree. Please address your qualifications for each of these
points in your cover letter. The position starts fall (Aug) 2018.

*Stipend and tuition and fees*

This position includes support in the form of a graduate assistantship
(renewable, 12-month at $25,000), tuition and fee waiver, and health
insurance.

*About the program and Boise*

The Ecology, Evolution, and Behavior PhD is a new and modern graduate
program at Boise State University. This program brings together faculty
from across multiple academic departments, including biological sciences,
geosciences, anthropology, and the human-environment systems group to offer
relevant courses and provide unique mentorship and training opportunities.
Further, we have created a network of valuable connections in academia,
local relationships with federal and state agencies, nonprofits and NGOs,
as well as partnerships with international organizations, all dedicated to
providing students with transformative research and educational experiences
for diverse career opportunities.  To learn more, please visit:
http://eeb.boisestate.edu/.

Students in this program enjoy living in the beautiful city of Boise, which
strikes a perfect balance with close-by outdoor recreational activities as
well as a vibrant downtown life. Nestled in the foothills of the Rocky
Mountains and the capital of the State of Idaho, Boise is frequently
featured as a top-ranked metropolis.  The city has ample opportunities for
world-class outdoor activities year-round and a thriving arts and
entertainment culture.  In 2017, US News and World report ranked Boise the
12th best city to live in the United States.

*To Apply*

Please send via email in a single file attachment (include your last name
in the file name): a cover letter that states qualifications and career
goals, a CV with the names and contacts for 3 references, copies of
transcripts (unofficial are acceptable) and GRE scores and percentiles (not
combined) to Sven Buerki (email: [email protected]). Please put
“PhD application” in the subject line.  Applications will be reviewed as
they are received until January 12th. If you do not have GRE scores by the
deadline your application cannot be considered.  Top candidates will be
asked to formally apply to Boise State’s EEB program by January 20th.  All
admission decisions must be approved by the Graduate Dean.

Boise State University embraces and welcomes diversity in its faculty,
student body, and staff. Accordingly, applicants who would add to the
diversity and excellence of our academic community are encouraged to apply.

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