Postdoctoral Positions in Metagenomic Informatics
 
Microbes play fundamental roles in all biology-associated processes on the
planet. A powerful new tool in such studies is metagenomics wherein one uses
high throughput DNA sequencing methods on DNA isolated directly from
environmental samples. Metagenomics has the potential to revolutionize our
understanding of the normally hidden yet incredibly important world of
microorganisms. However this great potential comes with enormous challenges
in the analysis of the sequence data, including (i) the fragmentary nature
of sequence data, (ii) the sparse sampling of genomes, populations and
communities, and (iii) the unknown phylogenetic diversity and ecological
structure of the communities being sampled.
 
We are seeking five post-doctoral scientists and a bioinformatics engineer
to work on methodology for analysis of metagenomic data as part of a new
collaborative project: Integrating Statistical Evolutionary, and Ecological
Approaches to Metagenomics (iSEEM). The iSEEM Project, funded by the Gordon
and Betty Moore Foundation, takes an integrated, interdisciplinary approach
to metagenomic analysis. We will be working with the Community
Cyberinfrastructure for Advanced Marine Microbial Ecology Research and
Analysis (CAMERA) to make any methods we develop available to the broader
community. The project spans three labs, each with different areas of focus
and two institutions (UC Davis and U Oregon). Each position will be
associated with one of the PIs at their home institution.
 
More information available at: http://iseem.org
 
Qualifications
We are looking for people with a demonstrated interest in working at the
interface between the quantitative and biological sciences. We will offer a
generous salary and benefits commensurate with experience.
Postdocs: Applicants should have a PhD in a biological, computational,
mathematical, or statistical field. Programming skills are highly desirable.
Bioinformatics Engineer: Applicants should have substantial experience with
database programming (e.g. SQL), scripting (e.g. Perl or Python), and
bioinformatics tools.
 
Term
Appointments will last 2 years beginning in Summer 2008.
 
To apply
Please complete the appropriate online form at the iSEEM job application
website.
Postdocs: http://jobs.genomecenter.ucdavis.edu/start_app.php?job_id=77
Bioinformatics Engineer:
http://jobs.genomecenter.ucdavis.edu/start_app.php?job_id=78
 
You will be requested to upload the following materials:
(1) a brief cover letter explaining your background, career interests, and
preferred geographical location for work (if any),
(2) CV (including publications),
(3) names and contact information for three references.
 
All applications will be evaluated by all PIs. The locations of hires will
be determined mutually by the applicants and the PIs. We will evaluate
applications as they arrive, until the positions are filled.
 
 
The Labs
Jonathan A. Eisen (UC Davis)
U. C. Davis Genome Center
Center for Population Biology
Section of Evolution and Ecology
Department of Medical Microbiology and Immunology
http://128.120.136.15/mediawiki/index.php/Main_Page
 
Jessica L. Green (U Oregon)
Center for Ecology and Evolutionary Biology
Department of Biology
http://biology.uoregon.edu/people/green/index.html
 
Katherine S. Pollard (UC Davis)
U. C. Davis Genome Center
Center for Population Biology
Department of Statistics
http://docpollard.com/

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