Hi Daniel,
   There must be something else funny about your system.  I just took
   a CEI-TK1_SOM, flashed it with Colorado's images from their FTP
   site (if you don't already have access to these, you should ask
   Colorado Engineering --- they give it freely to customers), and
   checked it could boot.

   I then flashed the current upstream U-Boot, and attempted to boot,
   with bootm_boot_mode set to `sec' -- and  Linux Ubuntu booted.
   I then set the variable to `nonsec' and see:
...
  Jetson-TK1 eMMC boot options                                                  
  
     Enter choice: 1                                                            
     
  1:      primary kernel                                                        
  
  Retrieving file: /boot/zImage                                                 
  
  5995744 bytes read in 156 ms (36.7 MiB/s)                                     
  
  append: console=ttyS0,115200n8 console=tty1 no_console_suspend=1 
lp0_vec=2064@0t
  Retrieving file: /boot/tegra124-tk1-som-pm375-000-c00-00.dtb                  
  
  59720 bytes read in 11 ms (5.2 MiB/s)                                         
  
  ## Flattened Device Tree blob at 82000000                                     
  
     Booting using the fdt blob at 0x82000000                                   
  
     Using Device Tree in place at 82000000, end 82011947                       
  
  couldn't find /cpus                                                           
  
  ERROR: arch-specific fdt fixup failed                                         
  
    - must RESET the board to recover.                                          
   
...
which is what I expect.


My guess is that something on the eMMC has become corrupted, and you
may be best off reflashing the entire board using Colorado's image.
-- 
Dr Peter Chubb         Tel: +61 2 9490 5852      http://ts.data61.csiro.au/
Trustworthy Systems Group                     Data61, CSIRO (formerly NICTA)
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