Damn! you are right. The deps overriding should have gone in `allprojects` block.
Thanks for having spotted that and updated the building environment. Cheers, Paolo On Sun, May 19, 2019 at 2:42 AM Paul King <pa...@asert.com.au> wrote: > It seems repeatable locally. > > On Sun, May 19, 2019 at 10:17 AM Paul King <pa...@asert.com.au> wrote: > >> It looks like the gradle build needs some further work: >> >> [00:44:08] : [:nf-commons:compileGroovy] 00:44:08.057 [DEBUG] >> [org.gradle.api.internal.tasks.compile.NormalizingGroovyCompiler] Java >> compiler arguments: -source 1.8 -target 1.8 -d >> /var/teamcity/buildagent-jdk8/work/1d76058f36ec5c31/modules/nf-commons/build/classes/groovy/main >> -g -sourcepath -proc:none -XDuseUnsharedTable=true -classpath ...[other >> jars]...:/var/teamcity/.gradle/caches/modules-2/files-2.1/org.codehaus.groovy/groovy/2.5.6/6936e700f0fb1b50bac0698ada4347a769d40199/groovy-2.5.6.jar:...[other >> jars]... >> /var/teamcity/buildagent-jdk8/work/1d76058f36ec5c31/modules/nf-commons/src/main/nextflow/util/QuoteStringTokenizer.groovy >> /var/teamcity/buildagent-jdk8/work/1d76058f36ec5c31/modules/nf-commons/src/main/nextflow/util/CsvParser.groovy >> ...[other source files]... >> >> In some places I can see the Groovy version being overridden by the >> CI_GROOVY_VERSION value of 2.5.8-SNAPSHOT: >> >> [00:43:18] : [Step 1/1] 00:43:16.617 [QUIET] [system.out] >> Overriding >> org.codehaus.groovy:groovy:2.5.6 with version: 2.5.8-SNAPSHOT >> >> But in other places it seems not the case. >> >> Cheers, Paul. >> >> >> On Sat, May 11, 2019 at 6:52 PM Paolo Di Tommaso < >> paolo.ditomm...@gmail.com> wrote: >> >>> Hi guys, >>> >>> I'm renewing my plea to fix the Nextflow joint build >>> <http://ci.groovy-lang.org/viewType.html?buildTypeId=JointBuilds_Nextflow_Groovy25xJointBuild>. >>> This would have helped to early detect and prevent bugs such as >>> GROOVY-9115 <https://issues.apache.org/jira/browse/GROOVY-9115>. >>> >>> >>> Thanks, Paolo >>> >>> >>> On Mon, Feb 4, 2019 at 3:36 PM Paolo Di Tommaso < >>> paolo.ditomm...@gmail.com> wrote: >>> >>>> I'm raising again this issue. No way to fix it? >>>> >>>> >>>> p >>>> >>>> On Fri, Jan 11, 2019 at 12:51 PM Paul King <pa...@asert.com.au> wrote: >>>> >>>>> I get 2.5.6-SNAPSHOT as the version when I use locally built >>>>> snapshots. I presume it is something specific to the Nextflow build but >>>>> haven't had time to check yet. >>>>> >>>>> On Fri, Jan 11, 2019 at 6:25 PM Paolo Di Tommaso < >>>>> paolo.ditomm...@gmail.com> wrote: >>>>> >>>>>> Hi devs, >>>>>> >>>>>> Sorry if I insist on this, it may be that version string has not been >>>>>> updated on the 2.5.6 snapshot and therefore it's failing? >>>>>> >>>>>> >>>>>> p >>>>>> >>>>>> On Mon, Jan 7, 2019 at 8:16 PM Paolo Di Tommaso < >>>>>> paolo.ditomm...@gmail.com> wrote: >>>>>> >>>>>>> Daer maintainers, >>>>>>> >>>>>>> The Nextflow joint build >>>>>>> <http://ci.groovy-lang.org/project.html?projectId=JointBuilds_Nextflow&tab=projectOverview> >>>>>>> is failing with this error message. >>>>>>> >>>>>>> System.getenv('CI_GROOVY_VERSION') == GroovySystem.getVersion() >>>>>>> | | | >>>>>>> 2.5.6-SNAPSHOT | 2.5.5 >>>>>>> false >>>>>>> 10 differences (28% similarity) >>>>>>> 2.5.(6-SNAPSHOT) >>>>>>> 2.5.(5---------) >>>>>>> >>>>>>> >>>>>>> It looks the Groovy runtime version is not matching the declared >>>>>>> version by the `CI_GROOVY_VERSION` env var. >>>>>>> >>>>>>> Could you please give it a look. >>>>>>> >>>>>>> >>>>>>> Cheers, >>>>>>> Paolo >>>>>>> >>>>>>>
