Thanks Peter, I'll definitely check it out! No, I had no clue this existed. I even checked the documentation. Seems like a lot of features are there but not really advertised.
On Wed, Mar 23, 2022 at 12:07 AM Peter Abramowitsch <pabramowit...@gmail.com> wrote: > Hi Greg > I don't bother about segments but have been pretty successful using this to > get a document's sections. > > *add org.mitre.medfacts.uima.ZoneAnnotator > SectionRegex=org/mitre/medfacts/uima/section_regex.xml* > > Have you checked out this annotator? It creates "Heading" types and the > config file above is a good place to start from. It has a nice ability to > normalize section types so that if note type A and B both have assessment > sections that are somewhat titled differently, you can have them both > tagged with the same label. > > The annotator had some rough edges and unwanted printing in the log which > I've recently modified. Also I did some optimization of the code which was > wasting compute cycles by re-initializing itself for every document. I > can check it in, but you can get a good flavor of it by trying what's in > the codebase already. > > Peter > > > > > On Tue, Mar 22, 2022 at 6:33 PM Greg Silverman <g...@umn.edu.invalid> > wrote: > > > How do I modify org.apache.ctakes.typesystem.type.textspan.Segment to > > actually create annotations for document segments/sections? > > > > Also, how do I disable annotations for the SemanticRoleRelation > annotation > > type? > > > > Thanks! > > > > Greg-- > > > > -- > > Greg M. Silverman > > Senior Systems Developer > > NLP/IE <https://healthinformatics.umn.edu/research/nlpie-group> > > Department of Surgery > > University of Minnesota > > g...@umn.edu > > > -- Greg M. Silverman Senior Systems Developer NLP/IE <https://healthinformatics.umn.edu/research/nlpie-group> Department of Surgery University of Minnesota g...@umn.edu
