Oh, awesome. Thanks. I didn't realize it was only in the snapshot version.

On Fri, May 28, 2021 at 12:40 PM Finan, Sean <
sean.fi...@childrens.harvard.edu> wrote:

> Hi John,
>
> It shouldn't be excluded from ctakes-core, but if you are looking at the
> binary distributable or maven central artifact for ctakes 4.0.0.1 then it
> will definitely be absent as it didn't exist in that version.  It is only
> in the trunk version of ctakes currently under development.  You can use
> the trunk version in your maven project.
>
> In your pom:
> ...
>    <properties>
>       <ctakes.version>4.0.1-SNAPSHOT</ctakes.version>
> ...
>       <dependency>
>             <groupId>org.apache.ctakes</groupId>
>             <artifactId>ctakes-core</artifactId>
>             <version>${ctakes.version}</version>
> ...
>
> And you might need:
>    <repositories>
>       <repository>
>          <id>apache.snapshots</id>
>          <name>Apache Development Snapshot Repository</name>
>          <url>https://repository.apache.org/content/groups/snapshots/
> </url>
>          <releases>
>             <enabled>false</enabled>
>          </releases>
>          <snapshots>
>             <enabled>true</enabled>
>          </snapshots>
>       </repository>
>
>
>
>
> Use Example:
>
> /**
>  * Finds clinical procedures in text using regular expressions.
>  * Accepts parameters for the procedure's regular expression and the
> procedure's CUI.
>  */
> public class ApacheConDemoEngine extends JCasAnnotator_ImplBase {
>
>    @ConfigurationParameter(
>          name = "REGEX",
>          description = "Regular Rexpression to use for matching clinical
> procedures.",
>          defaultValue = "biopsy"
>    )
>    private String _regex;
>
>    @ConfigurationParameter(
>          name = "REGEX_CUI",
>          description = "CUI for matched clinical procedure expressions.",
>          defaultValue = "AC123"
>    )
>    private String _regexCui;
>
>    /**
>     * Finds Procedures using a regular expression and creates Identified
> Annotations.
>     */
>    @Override
>    public void process( JCas jCas ) throws AnalysisEngineProcessException {
>       IdentifiedAnnotationBuilder builder = new
> IdentifiedAnnotationBuilder()
>                .group( SemanticGroup.PROCEDURE )
>                .cui( _regexCui );
>       try ( RegexSpanFinder finder = new RegexSpanFinder( _regex ) ) {
>          finder.findSpans( jCas.getDocumentText() )
>                .forEach( span ->
>                      builder
>                            .span( span )
>                            .build( jCas ) );
>       } catch ( IllegalArgumentException iaE ) {
>          throw new AnalysisEngineProcessException( iaE );
>       }
>    }
>
> }
>
>
> Sean
>
>
> ________________________________________
> From: John Doe <lucanus...@gmail.com>
> Sent: Friday, May 28, 2021 10:45 AM
> To: dev@ctakes.apache.org
> Subject: How to find IdentifiedAnnotationBuilder in build [EXTERNAL]
>
> * External Email - Caution *
>
>
> Hello,
>
> I'm just wondering where IdentifiedAnnotationBuilder is located in the
> ctakes lib. I see it in the source code in ctakes-core but I can't find it
> in any of the maven dependency packages. I also extracted the ctakes-core
> jar in CTAKES_HOME/lib and still didn't find it. Is there a simple way to
> use this builder? Ideally, I could just add a dependency to my pom and pull
> it in but I can't seem to find any that have it. Why is it excluded from
> ctakes-core?
>
> Thanks.
>

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