Thanks Ghandi I really appreciate the details. P.
On Wed, Jul 22, 2020 at 10:18 PM gandhi rajan <gandhiraja...@gmail.com> wrote: > Hi Peter, > > To add more info, step by step info on UMLS installation is available in > the link - > > http://blog.appliedinformaticsinc.com/getting-started-with-metamorphosys-the-umls-installation-tool/ > > Once installed, refer - > https://cwiki.apache.org/confluence/display/CTAKES/Dictionary+Creator+GUI > and Select a *UMLS installation* directory as > <umls_root_dir>/<umls_download_version>/META (in my case > umls_root_dir\2020AA\META). > > After dictionary creation, the SQL scripts and custom dictionary XML will > be available under > <ctakes_root_dir>\resources\org\apache\ctakes\dictionary\lookup\fast > folder. > > Hope it helps. > > On Thu, Jul 23, 2020 at 3:16 AM Peter Abramowitsch < > pabramowit...@gmail.com> > wrote: > > > Thank you. That's helpful. The last time I did this years ago, the tool > > wasn't available and I just remember downloading some huge files. It's > > only mentioned in passing in two Ctakes Wiki pages - and not in > association > > with the dictionary creator. whereas the resources file, which is > > mentioned there has just the pre-built fast lookup. > > > > > > > > Peter > > > > On Wed, Jul 22, 2020 at 2:39 PM Thomas W Loehfelm > > <twloehf...@ucdavis.edu.invalid> wrote: > > > > > If you have downloaded and created a local UMLS installation using the > > > MetamorphoSys tool you should end up with a directory structure > something > > > like: > > > ../../umls/2020AA/META/{all of the various .RRF files} > > > > > > In that case, you want to point the DictionaryCreator tool to the > 2020AA > > > directory, i.e. the one that contains the META directory. > > > > > > From: Peter Abramowitsch <pabramowit...@gmail.com> > > > Reply-To: "dev@ctakes.apache.org" <dev@ctakes.apache.org> > > > Date: Wednesday, July 22, 2020 at 2:17 PM > > > To: "dev@ctakes.apache.org" <dev@ctakes.apache.org> > > > Subject: obtaining the UMLS set for the dictionary creator > > > > > > I've been trying to discover what directory the dictionary creator > wants > > > to see for "UMLS Installation" Although I have the dictionary and > > lvg > > > folders, inside ctakes-4.0-resources-bin.zip I don't see any folder > that > > > the dictionary creator is happy with. > > > > > > When I look for RRF files in my running installation, the only ones I > > see > > > are in the ytex folder and they're tiny. Of course the Snomed a-b > > folder > > > is there, > > > > > > I remember downloading the UMLS back 2014 and creating a dictionary > then, > > > I cannot find a link to the umls install I need for the dictionary > > creator > > > now? > > > > > > Can you help? > > > > > > I've tried every folder from here to the top of the > > > ctakes-4.0-resources-bin tree. > > > > > > [cid:ii_kcxv5co80] > > > **CONFIDENTIALITY NOTICE** This e-mail communication and any > attachments > > > are for the sole use of the intended recipient and may contain > > information > > > that is confidential and privileged under state and federal privacy > laws. > > > If you received this e-mail in error, be aware that any unauthorized > use, > > > disclosure, copying, or distribution is strictly prohibited. If you > > > received this e-mail in error, please contact the sender immediately > and > > > destroy/delete all copies of this message. > > > > > > > > -- > Regards, > Gandhi > > "The best way to find urself is to lose urself in the service of others > !!!" >
