Hi Manuel,

Your image got scrubbed by a server, but the problem may have been fixed in a 
recent xmi writer.  The latest xmi writer is in ctakes core and is named 
FileTreeXmiWriter.  One possible cause for a problem in the writer is if the 
document has some unexpected character or character combination.  A document 
reader should be massaging documents before they are processed and sent to the 
writer.  The most recent file reader is named FileTreeReader and is also in 
ctakes core.

Sean



From: Manuel Lamy [mailto:mmvp...@gmail.com]
Sent: Wednesday, January 24, 2018 5:10 PM
To: dev@ctakes.apache.org
Subject: Problem using CPE and XMI Writer CAS Consumer [EXTERNAL]

Hello guys,

I'm having problems running the CPE using a XMI Writer CAS Consumer. However, 
it works with other consumers.

Problem

In the figure below, you can see my setup and the error I'm obtaining:

[Imagem inline 2]

Logs

Concerning logs, I'm obtaining this from Intellij:

org.apache.uima.resource.ResourceInitializationException
            at 
org.apache.uima.collection.impl.CollectionProcessingEngine_impl.initialize(CollectionProcessingEngine_impl.java:81)
            at 
org.apache.uima.impl.UIMAFramework_impl._produceCollectionProcessingEngine(UIMAFramework_impl.java:438)
            at 
org.apache.uima.UIMAFramework.produceCollectionProcessingEngine(UIMAFramework.java:918)
            at 
org.apache.uima.tools.cpm.CpmPanel.startProcessing(CpmPanel.java:573)
            at org.apache.uima.tools.cpm.CpmPanel.access$000(CpmPanel.java:105)
            at org.apache.uima.tools.cpm.CpmPanel$1.run(CpmPanel.java:713)
Caused by: org.apache.uima.resource.ResourceConfigurationException
            at 
org.apache.uima.collection.impl.cpm.container.CPEFactory.produceIntegratedCasProcessor(CPEFactory.java:1093)
            at 
org.apache.uima.collection.impl.cpm.container.CPEFactory.getCasProcessors(CPEFactory.java:547)
            at 
org.apache.uima.collection.impl.cpm.BaseCPMImpl.init(BaseCPMImpl.java:253)
            at 
org.apache.uima.collection.impl.cpm.BaseCPMImpl.<init>(BaseCPMImpl.java:127)
            at 
org.apache.uima.collection.impl.CollectionProcessingEngine_impl.initialize(CollectionProcessingEngine_impl.java:73)
            ... 5 more
Caused by: java.lang.Exception: The component XMI Writer CAS Consumer cannot be 
created. (Thread Name: Thread-5)
            ... 10 more

Attempted Solutions

I only found one guy with the same problem as me. The solution proposed in the 
thread, by Sean Finan, was to change the xml of my consumer 
(__XmiWriterCasConsumer.xml), particularly the content of the tag 
<implementationName>, from

 
<implementationName>org.apache.ctakes.core.cc.XmiWriterCasConsumerCtakes</implementationName>

to

<implementationName>org.apache.uima.tools.components.XmiWriterCasConsumer</implementationName>



However, this didn't work. The error is exactly the same. I'm out of ideas 
about what to do. I would like to have the report of CPE in XMI, in order to 
read it with CVD. You can see the thread here:

http://mail-archives.apache.org/mod_mbox/ctakes-dev/201701.mbox/%3c29cefd1fa1b44ce4a8dc92ec8b1cd...@chexmail1a.chboston.org%3E<https://urldefense.proofpoint.com/v2/url?u=http-3A__mail-2Darchives.apache.org_mod-5Fmbox_ctakes-2Ddev_201701.mbox_-253C29cefd1fa1b44ce4a8dc92ec8b1cd882-40CHEXMAIL1A.CHBOSTON.ORG-253E&d=DwMFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=N5zX2YGt7jbGKsiWAN7z5tdADmV2PwJdHTvvx2oZ2fM&s=5c-Yr8TMBg7-VyEjwF7gJlT1xP3LpHC6dvnZbihxDPg&e=>



Result Expected

Running the CPE process and have outputs as XMI files.



Result Obtained

Running the CPE results in an error, specifically for the consumer 
__XMIWriterCasConsumer.



Conclusion

Do any of you guys had this problem before? Do you have a suggestion about how 
can it be solved? Thanks a lot



Best regards,

Manuel

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