Ooh - OMIM has released an api: http://omim.org/api
Sean -----Original Message----- From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] Sent: Thursday, December 07, 2017 8:11 AM To: Hari, Sekhar Cc: dev@ctakes.apache.org; u...@ctakes.apache.org Subject: RE: Drug-Allergy Contraindications [EXTERNAL] [SUSPICIOUS] I think that you are talking about metabolic genetics. That isn't the same thing, though there may be information in the fda drug/event or food/event, for instance for gum and soft drinks for phenylketonuria (PKU). But There may be a better way to get that information. Gene Ontology (GO) or Human Phenome Ontology (HPO)? Sean -----Original Message----- From: Hari, Sekhar [mailto:sekhar.h...@cgi.com] Sent: Thursday, December 07, 2017 8:04 AM To: Finan, Sean Cc: dev@ctakes.apache.org; u...@ctakes.apache.org Subject: RE: Drug-Allergy Contraindications [EXTERNAL] Thank you so much. I will check that. Just a question out of my curiosity - are Drug-Allergy (the so called ADR) the same as Drug-Gene interactions (for example: immunological reactions caused by a gene due to a particular drug substance)? Thanks, Sekhar H. -----Original Message----- From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] Sent: 07 December 2017 18:30 To: dev@ctakes.apache.org; u...@ctakes.apache.org Subject: RE: Drug-Allergy Contraindications [EXTERNAL] Hi Sekhar H., You could check out the downloads at openfda.gov https://urldefense.proofpoint.com/v2/url?u=https-3A__open.fda.gov_downloads_&d=DwIFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=iaiNRnm2HC44M__BYtKd7n-ykF_rhlKbAMBXpvpx73A&s=u7jx7Tlezy5T_AsqaB6MWeBAfoVPik_F5LZ3ukwwHZU&e= The json files in food/event and drug/event might help. Sean -----Original Message----- From: Hari, Sekhar [mailto:sekhar.h...@cgi.com] Sent: Thursday, December 07, 2017 7:38 AM To: u...@ctakes.apache.org; dev@ctakes.apache.org Subject: Drug-Allergy Contraindications [EXTERNAL] Hi - Is anybody aware of a database that stores all reported drug-allergy contraindications? Thanks, Sekhar H.
