To add more it only happens when using caspool On Sat, Feb 11, 2017 at 2:48 AM, Finan, Sean < sean.fi...@childrens.harvard.edu> wrote:
> Yes, thanks. I will try to look into this a little later. > > > > Sean > > > > *From:* shahid ashraf [mailto:sha...@trialx.com] > *Sent:* Friday, February 10, 2017 3:45 PM > *To:* Finan, Sean > *Subject:* Re: CAS Pool > > > > Are you looking for these lines > > > > 11 Feb 2017 02:13:59 INFO POSTagger - POS tagger model file: > org/apache/ctakes/postagger/models/mayo-pos.zip > > 11 Feb 2017 02:14:06 INFO LvgCmdApiResourceImpl - Loading NLM Norm and > Lvg with config file = /Users/shahid/projects/ > healthnlp/examples/ctakes-web-client/target/classes/org/ > apache/ctakes/lvg/data/config/lvg.properties > > 11 Feb 2017 02:14:06 INFO LvgCmdApiResourceImpl - config file absolute > path = /Users/shahid/projects/healthnlp/examples/ctakes-web- > client/target/classes/org/apache/ctakes/lvg/data/config/lvg.properties > > 11 Feb 2017 02:14:06 INFO LvgCmdApiResourceImpl - cwd = > /Users/shahid/projects/healthnlp/examples/ctakes-web-client > > 11 Feb 2017 02:14:06 INFO LvgCmdApiResourceImpl - cd > /Users/shahid/projects/healthnlp/examples/ctakes-web- > client/target/classes/org/apache/ctakes/lvg/ > > 11 Feb 2017 02:14:06 INFO LvgCmdApiResourceImpl - cd > /Users/shahid/projects/healthnlp/examples/ctakes-web-client > > 11 Feb 2017 02:14:07 INFO DrugMentionAnnotator - Finite state machines > loaded. > > > > On Sat, Feb 11, 2017 at 2:01 AM, Finan, Sean < > sean.fi...@childrens.harvard.edu> wrote: > > Hi Shahid, > > > > Are you getting any log information from the lvg classes during > initialization? > > > > Sean > > > > *From:* shahid ashraf [mailto:sha...@trialx.com] > *Sent:* Friday, February 10, 2017 2:50 PM > *To:* dev@ctakes.apache.org; Finan, Sean > *Subject:* CAS Pool > > > > > Hi > > > > I was able to create the caspool using the descriptor approach, but > instead of getting ctakes blocked which was happening without caspool when > multiple threads are ran. > > Currently i am getting following error: > > > > Feb 10, 2017 8:44:06 PM > org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl > callAnalysisComponentProcess(430) > > SEVERE: Exception occurred > > org.apache.uima.analysis_engine.AnalysisEngineProcessException > > at org.apache.ctakes.lvg.ae > <https://urldefense.proofpoint.com/v2/url?u=http-3A__org.apache.ctakes.lvg.ae&d=DwMFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=ZDqfnqc8s6SO7UnXkW_LfiKDd3-1jgYMVLoLMdCrVC8&s=mz9hN1V1RYm97GOnmPU3P52EoPoye6lBvN6AhIFsTL8&e=> > .LvgAnnotator.process(LvgAnnotator.java:310) > > at org.apache.uima.analysis_component.JCasAnnotator_ > ImplBase.process(JCasAnnotator_ImplBase.java:48) > > at org.apache.uima.analysis_engine.impl. > PrimitiveAnalysisEngine_impl.callAnalysisComponentProcess( > PrimitiveAnalysisEngine_impl.java:396) > > at org.apache.uima.analysis_engine.impl. > PrimitiveAnalysisEngine_impl.processAndOutputNewCASes( > PrimitiveAnalysisEngine_impl.java:314) > > at org.apache.uima.analysis_engine.asb.impl.ASB_impl$ > AggregateCasIterator.processUntilNextOutputCas(ASB_impl.java:570) > > at org.apache.uima.analysis_engine.asb.impl.ASB_impl$ > AggregateCasIterator.<init>(ASB_impl.java:412) > > at org.apache.uima.analysis_engine.asb.impl.ASB_impl. > process(ASB_impl.java:344) > > at org.apache.uima.analysis_engine.impl. > AggregateAnalysisEngine_impl.processAndOutputNewCASes( > AggregateAnalysisEngine_impl.java:265) > > at org.apache.uima.analysis_engine.impl. > AnalysisEngineImplBase.process(AnalysisEngineImplBase.java:269) > > at org.apache.uima.analysis_engine.impl. > MultiprocessingAnalysisEngine_impl.process(MultiprocessingAnalysisEngine_ > impl.java:199) > > at org.apache.ctakes.web.client.servlet.DemoServlet.doPost( > DemoServlet.java:135) > > at javax.servlet.http.HttpServlet.service( > HttpServlet.java:755) > > at javax.servlet.http.HttpServlet.service( > HttpServlet.java:848) > > at org.eclipse.jetty.servlet.ServletHolder.handle( > ServletHolder.java:684) > > at org.eclipse.jetty.servlet.ServletHandler.doHandle( > ServletHandler.java:501) > > at org.eclipse.jetty.server.handler.ScopedHandler.handle( > ScopedHandler.java:137) > > at org.eclipse.jetty.security.SecurityHandler.handle( > SecurityHandler.java:557) > > at org.eclipse.jetty.server.session.SessionHandler. > doHandle(SessionHandler.java:231) > > at org.eclipse.jetty.server.handler.ContextHandler. > doHandle(ContextHandler.java:1086) > > at org.eclipse.jetty.servlet.ServletHandler.doScope( > ServletHandler.java:428) > > at org.eclipse.jetty.server.session.SessionHandler. > doScope(SessionHandler.java:193) > > at org.eclipse.jetty.server.handler.ContextHandler. > doScope(ContextHandler.java:1020) > > at org.eclipse.jetty.server.handler.ScopedHandler.handle( > ScopedHandler.java:135) > > at org.eclipse.jetty.server.handler.HandlerWrapper.handle( > HandlerWrapper.java:116) > > at org.eclipse.jetty.server.Server.handle(Server.java:370) > > at org.eclipse.jetty.server.AbstractHttpConnection. > handleRequest(AbstractHttpConnection.java:494) > > at org.eclipse.jetty.server.AbstractHttpConnection.content( > AbstractHttpConnection.java:982) > > at org.eclipse.jetty.server.AbstractHttpConnection$ > RequestHandler.content(AbstractHttpConnection.java:1043) > > at org.eclipse.jetty.http.HttpParser.parseNext( > HttpParser.java:865) > > at org.eclipse.jetty.http.HttpParser.parseAvailable( > HttpParser.java:240) > > at org.eclipse.jetty.server.AsyncHttpConnection.handle( > AsyncHttpConnection.java:82) > > at org.eclipse.jetty.io.nio.SelectChannelEndPoint.handle( > SelectChannelEndPoint.java:667) > > at org.eclipse.jetty.io.nio.SelectChannelEndPoint$1.run( > SelectChannelEndPoint.java:52) > > at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob( > QueuedThreadPool.java:608) > > at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run( > QueuedThreadPool.java:543) > > at java.lang.Thread.run(Thread.java:745) > > Caused by: org.apache.uima.analysis_engine.AnalysisEngineProcessException > > at org.apache.ctakes.lvg.ae > <https://urldefense.proofpoint.com/v2/url?u=http-3A__org.apache.ctakes.lvg.ae&d=DwMFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=ZDqfnqc8s6SO7UnXkW_LfiKDd3-1jgYMVLoLMdCrVC8&s=mz9hN1V1RYm97GOnmPU3P52EoPoye6lBvN6AhIFsTL8&e=> > .LvgAnnotator.setCanonicalForm(LvgAnnotator.java:372) > > at org.apache.ctakes.lvg.ae > <https://urldefense.proofpoint.com/v2/url?u=http-3A__org.apache.ctakes.lvg.ae&d=DwMFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=ZDqfnqc8s6SO7UnXkW_LfiKDd3-1jgYMVLoLMdCrVC8&s=mz9hN1V1RYm97GOnmPU3P52EoPoye6lBvN6AhIFsTL8&e=> > .LvgAnnotator.annotateRange(LvgAnnotator.java:342) > > at org.apache.ctakes.lvg.ae > <https://urldefense.proofpoint.com/v2/url?u=http-3A__org.apache.ctakes.lvg.ae&d=DwMFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=ZDqfnqc8s6SO7UnXkW_LfiKDd3-1jgYMVLoLMdCrVC8&s=mz9hN1V1RYm97GOnmPU3P52EoPoye6lBvN6AhIFsTL8&e=> > .LvgAnnotator.process(LvgAnnotator.java:307) > > ... 35 more > > Caused by: java.lang.NullPointerException > > > > > > -- > > with Regards > > Shahid Ashraf > > > > > > -- > > with Regards > > Shahid Ashraf > -- with Regards Shahid Ashraf
