Thanks Tim! -----Original Message----- From: Miller, Timothy [mailto:timothy.mil...@childrens.harvard.edu] Sent: Tuesday, January 17, 2017 2:05 PM To: dev@ctakes.apache.org Subject: Re: New to CTAKES [SUSPICIOUS] [SUSPICIOUS]
There are new sentence detector and coref modules in sandbox but I've just graduated the code into the existing ctakes-core and ctakes- coreference modules once it's ready. Tim On Tue, 2017-01-17 at 18:22 +0000, Finan, Sean wrote: > Hi Joyce, > > Thank you for the information on your background and what is being > done for/by the VA. That is very interesting and I am very curious > to find out what happens after your analyses. Any contribution back > to the open source is welcome! > > I am in the process of moving the dictionary builder gui into trunk > from sandbox. Other than that I am not aware of anything that is > moving over from sandbox. Are you interested in any particular > project? > > Is anybody else out there working on moving something from sandbox to > trunk? > > Thanks, > Sean > > -----Original Message----- > From: Dunlop, Joyce (HP) [mailto:joyce.dun...@va.gov] > Sent: Tuesday, January 17, 2017 1:13 PM > To: dev@ctakes.apache.org > Subject: RE: New to CTAKES > > Hi Sean F, > > Thanks for the information. > > A little background on me and my Group. We have been contracted by > the Veteran's administration to get CTAKES/YTEX running within the VA > Network. > > Our efforts will include: > > -Run HP Fortify source code analyzer against the software to bring it > into VA's security compliance. > -Evaluating and bring YTEX into 508 Compliance. > -Integrate LEO into the database connections. > > The hope would be to release a sanitized version of CTAKE back to > the open source community once these activities are > complete. Releasing back to open source take some time and has to go > through the VA's processes. > > We had to start with 3.2.2 because it was a stable release so > potentially integrating any changes we make back into the next > release may take some effort. > > I did notice several packages in the sandbox version of the code. Is > there any plans to bring any of those new packages into the trunk? > > Thanks, > Joyce > > > > > -----Original Message----- > From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] > Sent: Tuesday, January 17, 2017 11:54 AM > To: dev@ctakes.apache.org > Subject: [EXTERNAL] RE: New to CTAKES > > > > > 3.2.3 is still considered a snapshot - do you have any feeling > > when/if it will be released? > Good question. > > One person has volunteered to be a release manager and we at the > Boston Children's Hospital nlp group are trying to get some > additional hands on the task. There are still outstanding > bugs. Ctakes-core is undergoing some changes and should be tested > before release. I think that the state is good, but in my opinion > the whole app needs to have some end-to-end testing before a major > release. At a recent hackathon, 50% of those present could not by > themselves get ctakes installed and running even with written > instructions. In my mind a release that is not usable is not a > release at all, so I think that we need to devote a little effort to > usability. Again, that is just my opinion. I have put in time over > the past few months to work on making ctakes easier for newcomers and > non-developers. As you noticed, a fair amount of online > documentation is stale, and it would be great if people volunteered > to update it before a release. After that there are just the matters > of updating the main website links, publicizing the release, release > notes, and a parade with balloons. > > It think that everybody out there would be happy if there was a new > official, stable and useable release. I also think that we can get > one of good quality together within the next 3 months - more quickly > if there are volunteers from the community. > > Sean > > > -----Original Message----- > From: Dunlop, Joyce (HP) [mailto:joyce.dun...@va.gov] > Sent: Tuesday, January 17, 2017 12:32 PM > To: dev@ctakes.apache.org > Subject: RE: New to CTAKES > > Thanks Sean, > > 3.2.3 is still considered a snapshot - do you have any feeling > when/if it will be released? > > Thanks, > Joyce > > -----Original Message----- > From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] > Sent: Tuesday, January 17, 2017 10:57 AM > To: dev@ctakes.apache.org > Subject: [EXTERNAL] RE: New to CTAKES > > Hi Joyce, > > If you are building from source then you should not need to manually > download the resources. Maven should be doing it for you. Well, > that is the behavior of 3.2.3 ... I honestly cannot remember what > 3.2.2 did ... > > Otherwise, I think that if the latest was the 3.2.1.1 then that is > probably the most appropriate for the 3.2.2 release if you want all > of the resources. > > As for building and deploying ytex, I don't have any advice. Perhaps > some ytex power-user out there can help. > > Sean > > -----Original Message----- > From: Dunlop, Joyce (HP) [mailto:joyce.dun...@va.gov] > Sent: Tuesday, January 17, 2017 11:25 AM > To: dev@ctakes.apache.org > Cc: Dorner, Andrew J. (PSI); Rustrian, Armando (Liberty ITS) > Subject: New to CTAKES > > Good Morning, > > I am trying to set up a development environment using the source > release of 3.2.2. > > Reading though the documentation on > > https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org > _confluence_display_CTAKES_cTAKES-2B3.2-2BDeveloper-2BInstall- > 2BGuide&d=DwIFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67 > GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=yBXENVQKpWjVraf6Zf7uY5l9LJx > xrRiiE-yjyFID6d8&s=iqpkHc0kT5mucNnxYyc1mczXXlbmSVJlX-8dxeJvp2o&e= . > > Merge the version-matching resources ZIP file from > https://urldefense.proofpoint.com/v2/url?u=https-3A__urldefense&d=DwIGaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=BGxHriTJNPK1gRxPEKQBu7PGq9Gp4vawfMNTqZc4etI&s=bZG6uh8ZKRIKdQdjIvYHpiMHM-OSxMv8l3S80nNNrZU&e= > > .proofpoint.com/v2/url?u=http- > 3A__sourceforge.net_projects_ctakesresources_files_&d=DwIFAg&c=qS4goW > BT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0b > cpKGd4f7d4gTao&m=yBXENVQKpWjVraf6Zf7uY5l9LJxxrRiiE- > yjyFID6d8&s=wPUG8d9qpl_kQBPP5xI9y84mwMEXfaB2cdbkHvWaa0Y&e= into your > ctakes-dictionary-lookup-res project. > > ctakes-resources-3.2.1.1-bin.zip<https://urldefense.proofpoint.com/v2> > /url?u=https- > 3A__sourceforge.net_projects_ctakesresources_files_ctakes- > 2Dresources-2D3.2.1.1- > 2Dbin.zip_download&d=DwIFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCopp > xeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=yBXENVQKpWjVraf6 > Zf7uY5l9LJxxrRiiE- > yjyFID6d8&s=pErHE2p1qFyPeMACLDvshPiTpNZXM847MgGESOtvyuU&e= > is > available for download. Is there a 3.2.2 version of the resources? > > After reading some of the posts from the email box, and reading the > documentation on the site above. It looks like the documentation may > be somewhat dated and not fulling integrated for YTEX. > > Would you have any recommendations in advance on how to set up a > build process for deployment and YTEX database from scratch? > > Thanks, > Joyce > > > > >
