Hi, Thanks for you interest. --xml should point to the directory where the raw anafora data sits. --xmi should be the directory where the xmi will be written. This is basically a convenience -- if you rerun the eval it will check that directory and only run the ctakes NLP pipelines if they haven't been run before. --patients is the set of patient indices to use. For clinical tempeval 2016 I believe they used 1-200? --*-remainders is the remainders to use for train/dev/test splits, using patient num % 8. The official split is 0,1,2,3 = train, 4,5 = dev, 6,7 = test. The reason this is an option is because during development you don't want to eval on test, and also because tempeval used the dev set for testing the first year I believe.
Hope this helps. Tim On Tue, 2016-09-06 at 20:15 +0530, Manikandan R wrote: > Hi all, > > I am a newbee to Ctakes ,so please pardon my ignorance. > I was trying to experiment with new features for container relation > using thyme corpus and evaluate the results . > For this I have to retrain and build model with new feature which I am > planning to add. > > By going through the code i understood that the training and > evaluation is done at > > /ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfEventTimeRelations.java > > But when i try to run the above file, > it throws error asking me to pass following option parameters > -xml > -xmi > -patients > -train-reminders > -dev-remainders > -test-remainders > > Any pointers regarding the explanation of these option parameters and > how to train using Thyme corpus would be helpful
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