On Mon, Oct 6, 2014 at 3:59 PM, Bruce Tietjen <bruce.tiet...@perfectsearchcorp.com> wrote: > Since I started working with cTakes some time ago, I have found it > difficult to compare the output between subsequent runs on the same files > because annotations are often assigned different IDs, are listed in > different order, etc.
At one point, I spent some time writing a script for diff-ing CASes that intended to address some of these kinds of issues. It's still here in cTAKES: ctakes-temporal/src/main/java/org/apache/ctakes/temporal/data/analysis/CompareFeatureStructures.java You might see if you could use or adapt that to your needs. Steve
