Cancelling the rc-1. Will send out another vote thread for RC2 shortly. --Pei
On Tue, Jul 8, 2014 at 10:53 AM, Pei Chen <chen...@apache.org> wrote: > It's the latter: > the -src is basically the same as the dev install w/o the subversion > checkout step... > > > On Tue, Jul 8, 2014 at 7:15 AM, Miller, Timothy < > timothy.mil...@childrens.harvard.edu> wrote: > >> One other thing -- the User install guide says to download the -bin and >> the Dev install guide has you checking out from trunk. And the README in >> the -src distribution has instructions that only make sense for the -bin >> distribution. >> Are there instructions somewhere for how to install the -src version or >> are they basically the same as the dev install w/o the subversion checkout >> step? >> >> Tim >> >> ________________________________________ >> From: Pei Chen [chen...@apache.org] >> Sent: Monday, July 07, 2014 12:06 PM >> To: dev@ctakes.apache.org >> Subject: Re: [VOTE] Release Apache cTAKES 3.2.0 >> >> Thanks for testing this Tim. I could recreate this on my mac now (worked >> previously on windows on luck because of the class load order). >> Essentially, the old mitre assertion module and LVG resources still need >> to >> be unpacked. We don't have access to modify the underlying lib to read >> from a stream, I'm just going to omit/exclude the redundant >> ctakes-assertion-res.jar from the distro (as the assertion module will be >> updated in the future release anyway). >> Let me know if you encounter anything else, otherwise will plan to create >> an RC-2. >> >> >> On Fri, Jul 4, 2014 at 12:01 PM, Miller, Timothy < >> timothy.mil...@childrens.harvard.edu> wrote: >> >> > I get an error when I try to run the CVD following the README >> instructions >> > for the binary release: >> > >> > 7/4/14 11:56:03 AM - 12: >> > org.apache.uima.tools.cvd.MainFrame.handleException(527): SEVERE: >> > Initialization of annotator class >> > "org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine" failed. >> > (Descriptor: >> > >> file:/home/tmill/Projects/sandbox/ctakes-rcs/apache-ctakes-3.2.0/desc/ctakes-assertion/desc/assertionAnalysisEngine.xml) >> > org.apache.uima.resource.ResourceInitializationException: Initialization >> > of annotator class >> > "org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine" failed. >> > (Descriptor: >> > >> file:/home/tmill/Projects/sandbox/ctakes-rcs/apache-ctakes-3.2.0/desc/ctakes-assertion/desc/assertionAnalysisEngine.xml) >> > at >> > >> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:252) >> > at >> > >> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:156) >> > at >> > >> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94) >> > at >> > >> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62) >> > at >> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269) >> > at >> > >> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387) >> > at >> > >> org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185) >> > at >> > >> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94) >> > at >> > >> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62) >> > at >> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269) >> > at >> > >> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387) >> > at >> > >> org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375) >> > at >> > >> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185) >> > at >> > >> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94) >> > at >> > >> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62) >> > at >> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269) >> > at >> > >> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:354) >> > at >> org.apache.uima.tools.cvd.MainFrame.setupAE(MainFrame.java:1484) >> > at >> > org.apache.uima.tools.cvd.MainFrame.loadAEDescriptor(MainFrame.java:477) >> > at >> > >> org.apache.uima.tools.cvd.control.AnnotatorOpenEventHandler.actionPerformed(AnnotatorOpenEventHandler.java:52) >> > at >> > javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2018) >> > at >> > >> javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2341) >> > at >> > >> javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402) >> > at >> > javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259) >> > at javax.swing.AbstractButton.doClick(AbstractButton.java:376) >> > at >> > javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:833) >> > at >> > >> javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:877) >> > at java.awt.Component.processMouseEvent(Component.java:6505) >> > at >> javax.swing.JComponent.processMouseEvent(JComponent.java:3311) >> > at java.awt.Component.processEvent(Component.java:6270) >> > at java.awt.Container.processEvent(Container.java:2229) >> > at java.awt.Component.dispatchEventImpl(Component.java:4861) >> > at java.awt.Container.dispatchEventImpl(Container.java:2287) >> > at java.awt.Component.dispatchEvent(Component.java:4687) >> > at >> > java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4832) >> > at >> > java.awt.LightweightDispatcher.processMouseEvent(Container.java:4492) >> > at >> > java.awt.LightweightDispatcher.dispatchEvent(Container.java:4422) >> > at java.awt.Container.dispatchEventImpl(Container.java:2273) >> > at java.awt.Window.dispatchEventImpl(Window.java:2719) >> > at java.awt.Component.dispatchEvent(Component.java:4687) >> > at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:735) >> > at java.awt.EventQueue.access$200(EventQueue.java:103) >> > at java.awt.EventQueue$3.run(EventQueue.java:694) >> > at java.awt.EventQueue$3.run(EventQueue.java:692) >> > at java.security.AccessController.doPrivileged(Native Method) >> > at >> > >> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76) >> > at >> > >> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:87) >> > at java.awt.EventQueue$4.run(EventQueue.java:708) >> > at java.awt.EventQueue$4.run(EventQueue.java:706) >> > at java.security.AccessController.doPrivileged(Native Method) >> > at >> > >> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76) >> > at java.awt.EventQueue.dispatchEvent(EventQueue.java:705) >> > at >> > >> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242) >> > at >> > >> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161) >> > at >> > >> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150) >> > at >> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146) >> > at >> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138) >> > at java.awt.EventDispatchThread.run(EventDispatchThread.java:91) >> > Caused by: java.lang.RuntimeException: problem accessing resource >> > at >> > >> org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine.initialize(AssertionAnalysisEngine.java:114) >> > at >> > >> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:250) >> > ... 62 more >> > Caused by: org.apache.uima.resource.ResourceAccessException >> > at >> > >> org.apache.uima.impl.UimaContext_ImplBase.getResourceFilePath(UimaContext_ImplBase.java:253) >> > at >> > >> org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine.initialize(AssertionAnalysisEngine.java:93) >> > ... 63 more >> > >> > >> > ________________________________________ >> > From: Finan, Sean [sean.fi...@childrens.harvard.edu] >> > Sent: Wednesday, July 02, 2014 3:49 PM >> > To: dev@ctakes.apache.org >> > Subject: RE: [VOTE] Release Apache cTAKES 3.2.0 >> > >> > +1 >> > >> > Pulled fresh candidate, built, and ran Clinical using CPE without >> problem. >> > Other than that, no testing. SVN gave me a problem initially (checked >> out >> > as anonymous) asking for a password then flunking the checkout, but an >> > update completed it. I blame the heat. >> > ________________________________________ >> > From: Masanz, James J. [masanz.ja...@mayo.edu] >> > Sent: Monday, June 30, 2014 10:24 PM >> > To: dev@ctakes.apache.org >> > Subject: RE: [VOTE] Release Apache cTAKES 3.2.0 >> > >> > This is pretty obvious, but since this is a record of what was voted >> upon, >> > note that some of the URLs contain an extra >> > >> > ctakes-3.2.0/ >> > >> > For example >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz >> > >> > should be just >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz >> > >> > -- James >> > >> > ________________________________________ >> > From: Pei Chen [chen...@apache.org] >> > Sent: Friday, June 27, 2014 5:15 PM >> > To: dev@ctakes.apache.org >> > Subject: [VOTE] Release Apache cTAKES 3.2.0 >> > >> > Hi all, >> > >> > This is a call for a vote on releasing the following candidate (rc1) as >> > Apache cTAKES 3.2.0. >> > The major changes include: >> > - New optional YTEX component(s) (Yale Extensions to cTAKES) >> > - New optional improved/faster dictionary lookup >> (dictionary-lookup-fast) >> > - New optional Temporal component (Time + Event extraction. Relations >> will >> > be including in a future release.) >> > - Other bug fixes/enhancements from Jira >> > >> > [TODO: Online documentation still needs to be updated on wiki for the >> abo] >> > >> > For more detailed information on the changes/release notes, please >> visit: >> > >> > >> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12324066 >> > >> > The release was made using the cTAKES release process documented here: >> > http://ctakes.apache.org/ctakes-release-guide.html >> > >> > The candidate is available at: >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz >> > /.zip >> > >> > The tag to be voted on: >> > http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.0-rc1/ >> > >> > The MD5 checksum of the tarball can be found at: >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz.md5 >> > /.zip.md5 >> > >> > The signature of the tarball can be found at: >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz.asc >> > /.zip.asc >> > >> > Apache cTAKES' KEYS file, containing the PGP keys used to sign the >> release: >> > https://dist.apache.org/repos/dist/release/ctakes/KEYS >> > >> > Please vote on releasing these packages as Apache cTAKES 3.2.0. The >> vote is >> > open for at least the next 72 hours. >> > Only votes from the cTAKES PMC are binding, but folks are welcome to >> check >> > the release candidate and voice their approval or disapproval. >> > The vote passes if at least three binding +1 votes are cast. >> > >> > [ ] +1 Release the packages as Apache cTAKES 3.2.0 >> > [ ] -1 Do not release the packages because... >> > >> > Also, the convenience binary can be found at: >> > >> > >> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-bin.tar.gz >> > /.zip >> > Note: It's tempoarily on people.a.o because the artifacts were too large >> > for https://dist.apache.org/repos/dist/dev/ctakes (Working with infra >> on >> > increasing the limit). >> > >> > >> > Thanks! >> > >> > >
