Uwe L. Korn created ARROW-65:
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Summary: Python: FindPythonLibsNew does not work in a virtualenv
Key: ARROW-65
URL: https://issues.apache.org/jira/browse/ARROW-65
Project: Apache Arrow
Issue Type: Bug
Components: Python
Reporter: Uwe L. Korn
It fails on latest Gentoo System with Python 3.4 as the main python, see the
attached log.
In constrast, CMake 3.5's own FindPythonLibs works. Is there any reason for
shipping a custom FindPythonLibs with PyArrow? Should we possibly make it
depended on the calling CMake version?
Log:
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-- The C compiler identification is GNU 5.3.0
-- The CXX compiler identification is GNU 5.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
Configured for DEBUG build (set with cmake
-DCMAKE_BUILD_TYPE={release,debug,...})
INFO Using built-in specs.
COLLECT_GCC=/usr/x86_64-pc-linux-gnu/gcc-bin/5.3.0/c++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-pc-linux-gnu/5.3.0/lto-wrapper
Target: x86_64-pc-linux-gnu
Configured with:
/var/tmp/notmpfs/portage/sys-devel/gcc-5.3.0/work/gcc-5.3.0/configure
--host=x86_64-pc-linux-gnu --build=x86_64-pc-linux-gnu --prefix=/usr
--bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/5.3.0
--includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/include
--datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/5.3.0
--mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/5.3.0/man
--infodir=/usr/share/gcc-data/x86_64-pc-linux-gnu/5.3.0/info
--with-gxx-include-dir=/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/include/g++-v5
--with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/5.3.0/python
--enable-languages=c,c++,java,go,fortran --enable-obsolete --enable-secureplt
--disable-werror --with-system-zlib --enable-nls --without-included-gettext
--enable-checking=release --with-bugurl=https://bugs.gentoo.org/
--with-pkgversion='Gentoo 5.3.0 p1.0, pie-0.6.5' --enable-libstdcxx-time
--enable-shared --enable-threads=posix --enable-__cxa_atexit
--enable-clocale=gnu --enable-multilib --with-multilib-list=m32,m64
--disable-altivec --disable-fixed-point --enable-targets=all --enable-libgomp
--disable-libmudflap --disable-libssp --disable-libcilkrts --enable-lto
--without-isl --enable-libsanitizer
Thread model: posix
gcc version 5.3.0 (Gentoo 5.3.0 p1.0, pie-0.6.5)
Selected compiler gcc 5.3.0
Using dynamic linking for DEBUG builds
collect2 version 5.3.0
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../x86_64-pc-linux-gnu/bin/ld
-plugin /usr/libexec/gcc/x86_64-pc-linux-gnu/5.3.0/liblto_plugin.so
-plugin-opt=/usr/libexec/gcc/x86_64-pc-linux-gnu/5.3.0/lto-wrapper
-plugin-opt=-fresolution=/tmp/ccMLevrM.res -plugin-opt=-pass-through=-lgcc_s
-plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc
-plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc
--eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../lib64/crt1.o
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../lib64/crti.o
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/crtbegin.o
-L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0
-L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../lib64 -L/lib/../lib64
-L/usr/lib/../lib64
-L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../x86_64-pc-linux-gnu/lib
-L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../.. --version -lstdc++ -lm
-lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/crtend.o
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../lib64/crtn.o
Using ld linker
-- Found PythonInterp: /home/xhochy/.virtualenvs/arrow/bin/python (found
version "3.4.3")
-- Searching for Python libs in
/home/xhochy/.virtualenvs/arrow/lib64;/home/xhochy/.virtualenvs/arrow/lib;/usr/lib64/python3.4/config-3.4m
-- Found Python lib PYTHON_LIBRARY-NOTFOUND
-- Found PythonLibs: PYTHON_LIBRARY-NOTFOUND
-- Found Cython: /home/xhochy/.virtualenvs/arrow/bin/cython
-- Searching for Python libs in
/home/xhochy/.virtualenvs/arrow/lib64;/home/xhochy/.virtualenvs/arrow/lib;/usr/lib64/python3.4/config-3.4m
-- Found Python lib PYTHON_LIBRARY-NOTFOUND
-- Found the Arrow library: /home/xhochy/Development/dist/lib/libarrow.so
Added shared library dependency arrow:
/home/xhochy/Development/dist/lib/libarrow.so
CMake Error: The following variables are used in this project, but they are set
to NOTFOUND.
Please set them or make sure they are set and tested correctly in the CMake
files:
PYTHON_LIBRARY (ADVANCED)
linked by target "schema" in directory /home/xhochy/Development/arrow/python
linked by target "schema" in directory /home/xhochy/Development/arrow/python
linked by target "scalar" in directory /home/xhochy/Development/arrow/python
linked by target "scalar" in directory /home/xhochy/Development/arrow/python
linked by target "error" in directory /home/xhochy/Development/arrow/python
linked by target "error" in directory /home/xhochy/Development/arrow/python
linked by target "array" in directory /home/xhochy/Development/arrow/python
linked by target "array" in directory /home/xhochy/Development/arrow/python
linked by target "config" in directory /home/xhochy/Development/arrow/python
linked by target "config" in directory /home/xhochy/Development/arrow/python
-- Configuring incomplete, errors occurred!
See also
"/home/xhochy/Development/arrow/python/build/CMakeFiles/CMakeOutput.log".
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