that's an upstream bug and was fixed for 0.90 see
https://trac.transmissionbt.com/ticket/5685

** Changed in: transmission (Ubuntu)
       Status: Confirmed => Fix Committed

** Changed in: transmission (Ubuntu)
   Importance: Undecided => High

** Bug watch added: Transmission Trac #5685
   https://trac.transmissionbt.com/ticket/5685

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https://bugs.launchpad.net/bugs/1212835

Title:
  Missing icon from dock and dash

Status in transmission package in Ubuntu:
  Fix Committed

Bug description:
  The usual transmission icon is not visible in the dock, and the dash,
  instead the placeholder icons are visible (grey rectangle with
  question mark, paper icon)

  ProblemType: Bug
  DistroRelease: Ubuntu 13.10
  Package: transmission-qt 2.82-0ubuntu1
  ProcVersionSignature: Ubuntu 3.11.0-1.4-generic 3.11.0-rc4
  Uname: Linux 3.11.0-1-generic x86_64
  ApportVersion: 2.12-0ubuntu3
  Architecture: amd64
  Date: Thu Aug 15 22:41:04 2013
  InstallationDate: Installed on 2013-04-29 (108 days ago)
  InstallationMedia: Ubuntu 13.04 "Raring Ringtail" - Release amd64 (20130424)
  MarkForUpload: True
  SourcePackage: transmission
  UpgradeStatus: Upgraded to saucy on 2013-06-24 (52 days ago)

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