This bug was fixed in the package network-manager -
0.9.6.0~git201207271115.edb85e9-0ubuntu1

---------------
network-manager (0.9.6.0~git201207271115.edb85e9-0ubuntu1) quantal; urgency=low

  * upstream snapshot 2012-07-27 11:15:54 (GMT)
    + edb85e972051aff3cfcd5990ea1bd8a28dddc9d9
    - dnsmasq: allow custom configuration via /etc/NetworkManager/dnsmasq.d
  * debian/patches/dnsmasq-dbus-updates.patch: do dnsmasq server updates via
    DBus, instead of respawning the process every time. (LP: #1004775)
  * debian/patches/dnsmasq-vpn-dns-filtering.patch: refreshed.
  * debian/patches/nm-change-dnsmasq-parameters.diff: refreshed.
  * debian/patches/add_sendsigs_omissions.patch: refreshed.
 -- Mathieu Trudel-Lapierre <mathieu...@ubuntu.com>   Mon, 30 Jul 2012 09:13:32 
-0400

** Changed in: network-manager (Ubuntu Quantal)
       Status: In Progress => Fix Released

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https://bugs.launchpad.net/bugs/1004775

Title:
  NetworkManager restarts dnsmasq and adds host route on every IPv6
  route lookup

Status in “network-manager” package in Ubuntu:
  Fix Released
Status in “network-manager” source package in Precise:
  Triaged
Status in “network-manager” source package in Quantal:
  Fix Released

Bug description:
  NetworkManager stops and starts dnsmasq very frequently (every few
  minutes).  During the brief window that dnsmasq is restarting,
  hostname resolution doesn't work.  dnsmasq is getting restarted
  frequently enough that I see brief hostname resolution errors in
  Chrome several times a day during normal web browsing.

  This is on Precise with network-manager 0.9.4.0-0ubuntu4 and dnsmasq-
  base 2.59-4.

  The frequent restarts seem to be triggered by IPv6 route
  advertisements on my network.  (See log snippet below.)  When
  NetworkManager gets a route advertisement, it reconfigures everything.
  In the case of dnsmasq, this means stopping dnsmasq, writing a new
  config file, and starting dnsmasq.  NetworkManager should restart
  dnsmasq only if it its configuration changes.

  I'm attaching a snippet from /var/log/daemon.log on my system that
  demonstrates a restart.  This is with debug logging configured in
  /etc/NetworkManager/NetworkManager.conf.

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