@joe-dunster - yes, it should be fixed but you will need to run an
upgrade before you get the fix, it won't be in the main images until we
make new ones at 16.04.1 (July).  It will appear in the daily images
though.  If you downloaded the image from
http://releases.ubuntu.com/16.04/ubuntu-16.04-desktop-amd64.iso then
please run from the terminal:

sudo apt update
sudo apt upgrade

You should then get the new version of Software with the fixes to allow
you to install a .deb.

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https://bugs.launchpad.net/bugs/1573408

Title:
  GNOME Software does not install third-party .deb packages

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